RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 TOMM20Q15388 145 aa13.99□□□□□ -0.17
CHMP3-202ENST00000393773 TMEM81Q6P7N7 255 aa13.99□□□□□ -0.17
CHMP3-202ENST00000393773 PLXDC2Q6UX71 529 aa13.99□□□□□ -0.17
CHMP3-202ENST00000393773 ANGPTL8Q6UXH0 198 aa13.99□□□□□ -0.17
CHMP3-202ENST00000393773 CMC1Q7Z7K0 106 aa13.99□□□□□ -0.17
CHMP3-202ENST00000393773 YRDCQ86U90 279 aaKnown RBP13.99□□□□□ -0.17
CHMP3-202ENST00000393773 NUDT13Q86X67 352 aa13.99□□□□□ -0.17
CHMP3-202ENST00000393773 LRRC75A-AS1Q8N1F1 130 aa13.99□□□□□ -0.17
CHMP3-202ENST00000393773 STAG3L4Q8TBR4 150 aa13.99□□□□□ -0.17
CHMP3-202ENST00000393773 SLC44A1Q8WWI5 657 aa13.99□□□□□ -0.17
CHMP3-202ENST00000393773 HGDQ93099 445 aa13.99□□□□□ -0.17
CHMP3-202ENST00000393773 MDFIQ99750 246 aa13.99□□□□□ -0.17
CHMP3-202ENST00000393773 OR10A5Q9H207 317 aa13.99□□□□□ -0.17
CHMP3-202ENST00000393773 TCRBV9S1A1TA0A576 114 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 H0YIV9 168 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 PGRMC2O15173 223 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 PPM1BO75688 479 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 RCBTB2O95199 551 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 ABCB1P08183 1280 aaPredicted RBP13.98□□□□□ -0.17
CHMP3-202ENST00000393773 RHOXF2BP0C7M4 288 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 CPA2P48052 419 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 RPP38P78345 283 aaKnown RBP13.98□□□□□ -0.17
CHMP3-202ENST00000393773 CUL3Q13618 768 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 SETDB1Q15047 1291 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 NNATQ16517 81 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 LIPJQ5W064 366 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 HLA-DQA1Q5Y7H0 255 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 DESI1Q6ICB0 168 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 GCNT2Q8N0V5 402 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 TEX9Q8N6V9 391 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 OR1J4Q8NGS1 313 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 NUDT8Q8WV74 236 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 UCN2Q96RP3 112 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 PIP5K1AQ99755 562 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 OSBPL11Q9BXB4 747 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 OR2B2Q9GZK3 357 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 NXF5Q9H1B4 397 aaKnown RBP13.98□□□□□ -0.17
CHMP3-202ENST00000393773 WDR41Q9HAD4 459 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 GALNT9Q9HCQ5 603 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 TXNDC16Q9P2K2 825 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 PCDHGA11Q9Y5H2 935 aa13.98□□□□□ -0.17
CHMP3-202ENST00000393773 EFCAB8A8MWE9 144 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 H0Y3Z8 333 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 H7C1Q1 480 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 CDH16O75309 829 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 GBAP04062 536 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 TCP1P17987 556 aaKnown RBP13.97□□□□□ -0.17
CHMP3-202ENST00000393773 S1PR1P21453 382 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 PTX3P26022 381 aaPredicted RBP13.97□□□□□ -0.17
CHMP3-202ENST00000393773 GFRA1P56159 465 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 CYP20A1Q6UW02 462 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 MYLK4Q86YV6 388 aaPredicted RBP13.97□□□□□ -0.17
CHMP3-202ENST00000393773 WDR20Q8TBZ3 569 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 CDKL2Q92772 493 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 WNT2BQ93097 391 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 INTS12Q96CB8 462 aaKnown RBP13.97□□□□□ -0.17
CHMP3-202ENST00000393773 CTHRC1Q96CG8 243 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 NODALQ96S42 347 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 TM9SF2Q99805 663 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 ITPAQ9BY32 194 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 PIGMQ9H3S5 423 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 METTL7AQ9H8H3 244 aa13.97□□□□□ -0.17
CHMP3-202ENST00000393773 CHD3Q12873 2000 aaKnown RBP13.97□□□□□ -0.17
CHMP3-202ENST00000393773 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 LRRC14BA6NHZ5 514 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 DEFB108AA8MXU0 73 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 ARHGEF9O43307 516 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 UGDHO60701 494 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 TNFSF13O75888 250 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 PIK3R1P27986 724 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 CCKARP32238 428 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 CPOXP36551 454 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 PHEXP78562 749 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 SLMAPQ14BN4 828 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 SLC30A6Q6NXT4 461 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 CREG2Q8IUH2 290 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 CENPLQ8N0S6 344 aaPredicted RBP13.96□□□□□ -0.17
CHMP3-202ENST00000393773 OR7G1Q8NGA0 311 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 PYROXD1Q8WU10 500 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 Q96MF0 132 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 ACBD3Q9H3P7 528 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 ACTR8Q9H981 624 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 NMRAL1Q9HBL8 299 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 SERHLQ9NQF3 203 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 C6orf203Q9P0P8 240 aaPredicted RBP13.96□□□□□ -0.17
CHMP3-202ENST00000393773 PACSIN3Q9UKS6 424 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 MAPRE3Q9UPY8 281 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 SNX24Q9Y343 169 aa13.96□□□□□ -0.17
CHMP3-202ENST00000393773 A0A1W2PNV4 684 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 C2orf72A6NCS6 295 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 A8MXE2 369 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 HCRTR2O43614 444 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 SMPD2O60906 423 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 ICOSLGO75144 302 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 SEMA3DO95025 777 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 LTA4HP09960 611 aaKnown RBP13.95□□□□□ -0.18
CHMP3-202ENST00000393773 CPMP14384 443 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 NAGAP17050 411 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 KRT15P19012 456 aa13.95□□□□□ -0.18
CHMP3-202ENST00000393773 CNTFP26441 200 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms