RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 PPP2R1BP30154 601 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 MPIP34949 423 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 BUD31P41223 144 aaPredicted RBP14.04□□□□□ -0.16
MKS1-202ENST00000393119 CTSKP43235 329 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 TSFMP43897 325 aaKnown RBP14.04□□□□□ -0.16
MKS1-202ENST00000393119 FOXL2P58012 376 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 MLC1Q15049 377 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 TEAD4Q15561 434 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 KCTD21Q4G0X4 260 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 REEP3Q6NUK4 255 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 TMPRSS9Q7Z410 1059 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 SLC16A11Q8NCK7 471 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 OR4K14Q8NGD5 310 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 VANGL1Q8TAA9 524 aaPredicted RBP14.04□□□□□ -0.16
MKS1-202ENST00000393119 ISOC1Q96CN7 298 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 ARSGQ96EG1 525 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 GIMAP5Q96F15 307 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 COL21A1Q96P44 957 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 RLIMQ9NVW2 624 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 PDP1Q9P0J1 537 aaPredicted RBP14.04□□□□□ -0.16
MKS1-202ENST00000393119 MYRFQ9Y2G1 1151 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 SAMHD1Q9Y3Z3 626 aaKnown RBP14.04□□□□□ -0.16
MKS1-202ENST00000393119 RP1P56715 2156 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 TMEM131Q92545 1883 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 C5orf58C9J3I9 102 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 CHST10O43529 356 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 PRKNO60260 465 aaPredicted RBP14.04□□□□□ -0.16
MKS1-202ENST00000393119 GUCY1B2O75343 617 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 ZIC2O95409 532 aaPredicted RBP14.04□□□□□ -0.16
MKS1-202ENST00000393119 TDGF1P13385 188 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 CSF2RBP32927 897 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 EXOSC7Q15024 291 aaKnown RBP14.04□□□□□ -0.16
MKS1-202ENST00000393119 CRB2Q5IJ48 1285 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 TMEM151BQ8IW70 566 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 DHRSXQ8N5I4 330 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 PACRGLQ8N7B6 248 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 OR5K1Q8NHB7 308 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 GIPC3Q8TF64 312 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 PEX11GQ96HA9 241 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 SPATA9Q9BWV2 254 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 CTPS2Q9NRF8 586 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 ATXN7L1Q9ULK2 861 aaPredicted RBP14.04□□□□□ -0.16
MKS1-202ENST00000393119 CCDC88CQ9P219 2028 aa14.04□□□□□ -0.16
MKS1-202ENST00000393119 HRKO00198 91 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 FCMRO60667 390 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 MFN2O95140 757 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 NR2F1P10589 423 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 THRBP10828 461 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 ELK4P28324 431 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 GABRA4P48169 554 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 BTG2P78543 158 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 ADARB1P78563 741 aaKnown RBP14.03□□□□□ -0.16
MKS1-202ENST00000393119 RBBP4Q09028 425 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 ZC3H14Q6PJT7 736 aaKnown RBP14.03□□□□□ -0.16
MKS1-202ENST00000393119 Q6ZPB1 254 aaPredicted RBP14.03□□□□□ -0.16
MKS1-202ENST00000393119 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.03□□□□□ -0.16
MKS1-202ENST00000393119 ZNF764Q96H86 408 aaPredicted RBP14.03□□□□□ -0.16
MKS1-202ENST00000393119 COX4I2Q96KJ9 171 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 OR7D2Q96RA2 312 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 ELF4Q99607 663 aaPredicted RBP14.03□□□□□ -0.16
MKS1-202ENST00000393119 THUMPD1Q9NXG2 353 aaKnown RBP14.03□□□□□ -0.16
MKS1-202ENST00000393119 ANGPT4Q9Y264 503 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 UNC13CQ8NB66 2214 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 IGHV1OR21-1A0A087WYE8 117 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 URADA6NGE7 173 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 FRS3O43559 492 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 NTN1O95631 604 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 EPPINO95925 133 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 CD247P20963 164 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 MLLT3P42568 568 aaPredicted RBP14.03□□□□□ -0.16
MKS1-202ENST00000393119 GSTM5P46439 218 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 KCNAB2Q13303 367 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 SIM2Q14190 667 aaPredicted RBP14.03□□□□□ -0.16
MKS1-202ENST00000393119 CEBPEQ15744 281 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 ZBED5Q49AG3 693 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 CCNJQ5T5M9 372 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 KRT80Q6KB66 452 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 PRR23CQ6ZRP0 262 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 CCDC80Q76M96 950 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 TSPYL5Q86VY4 417 aaPredicted RBP14.03□□□□□ -0.16
MKS1-202ENST00000393119 LRRC25Q8N386 305 aaPredicted RBP14.03□□□□□ -0.16
MKS1-202ENST00000393119 ZNF655Q8N720 491 aaPredicted RBP14.03□□□□□ -0.16
MKS1-202ENST00000393119 SGCDQ92629 289 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 RMND5BQ96G75 393 aaPredicted RBP14.03□□□□□ -0.16
MKS1-202ENST00000393119 SLC35A4Q96G79 324 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 PHOX2BQ99453 314 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 NUDT22Q9BRQ3 303 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 A4GALTQ9NPC4 353 aa14.03□□□□□ -0.16
MKS1-202ENST00000393119 CLDN24A6NM45 220 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 M0R3H8 397 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 FFAR1O14842 300 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 PCDH17O14917 1159 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 HYAL3O43820 417 aaPredicted RBP14.02□□□□□ -0.16
MKS1-202ENST00000393119 CPMP14384 443 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 ZNF12P17014 697 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 CAPGP40121 348 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 GSSP48637 474 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 CDH12P55289 794 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 LSM11P83369 360 aaKnown RBP eCLIP14.02□□□□□ -0.16
MKS1-202ENST00000393119 PRTGQ2VWP7 1150 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms