RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 GASTP01350 101 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 MT-ND2P03891 347 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 SRFP11831 508 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 ELAVL4P26378 380 aaKnown RBP21.73■■□□□ 1.07
VPS16-201ENST00000380443 MAN2A2P49641 1150 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 EIF2B5Q13144 721 aaKnown RBP21.73■■□□□ 1.07
VPS16-201ENST00000380443 ILKQ13418 452 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 NDUFA9Q16795 377 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 TMEM31Q5JXX7 168 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 FRMPD2BQ6IN97 320 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 RNF44Q7L0R7 432 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 TRIM73Q86UV7 250 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 CROCCP3Q8IVE0 287 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 OR10G6Q8NH81 332 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 OR7D2Q96RA2 312 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 DCUN1D5Q9BTE7 237 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 ACOT13Q9NPJ3 140 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 GIN1Q9NXP7 522 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 DSPPQ9NZW4 1301 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 DAPP1Q9UN19 280 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 A0A1W2PPW3 197 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 CLCA1A8K7I4 914 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 CHRM4P08173 479 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 OSMP13725 252 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 GABRB1P18505 474 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 DUSP2Q05923 314 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 COX10Q12887 443 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 FGD3Q5JSP0 725 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 KLHL17Q6TDP4 642 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 DEF8Q6ZN54 512 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 USP53Q70EK8 1073 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 DNAJC22Q8N4W6 341 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 AVL9Q8NBF6 648 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 FUZQ9BT04 418 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 PTGFRNQ9P2B2 879 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 FTSJ1Q9UET6 329 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 SLC22A7Q9Y694 548 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 A0A0J9YVX5 310 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 TRBV4-1A0A0J9YWV2 114 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 ZNF217O75362 1048 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 UGT2B17O75795 530 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 THEGLP0DJG4 465 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 C8orf89P0DMQ9 161 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 ALOX12P18054 663 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 UGT2B15P54855 530 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 PTGES3Q15185 160 aaKnown RBP21.72■■□□□ 1.07
VPS16-201ENST00000380443 SMN1Q16637 294 aaKnown RBP21.72■■□□□ 1.07
VPS16-201ENST00000380443 GPAT3Q53EU6 434 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 UBE2UQ5VVX9 321 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 CD300LDQ6UXZ3 194 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 OR9A2Q8NGT5 310 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 GAB3Q8WWW8 586 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 GTPBP3Q969Y2 492 aaKnown RBP21.72■■□□□ 1.07
VPS16-201ENST00000380443 COPS4Q9BT78 406 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 ZNF226Q9NYT6 803 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 RHCGQ9UBD6 479 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 A4GNTQ9UNA3 340 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 DUSP12Q9UNI6 340 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 CYP8B1Q9UNU6 501 aa21.72■■□□□ 1.07
VPS16-201ENST00000380443 NARSO43776 548 aaKnown RBP21.71■■□□□ 1.07
VPS16-201ENST00000380443 CTSEP14091 401 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 MC3RP41968 323 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 IDH2P48735 452 aaKnown RBP21.71■■□□□ 1.07
VPS16-201ENST00000380443 XKP51811 444 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 TCEA2Q15560 299 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 ZNF750Q32MQ0 723 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 TAF8Q7Z7C8 310 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 KLHL6Q8WZ60 621 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 UBE2FQ969M7 185 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 YIPF6Q96EC8 236 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 PRRC1Q96M27 445 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 MS4A4EQ96PG1 132 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 FCRL4Q96PJ5 515 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 RSPO3Q9BXY4 272 aaPredicted RBP21.71■■□□□ 1.07
VPS16-201ENST00000380443 PLGRKTQ9HBL7 147 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 NECTIN3Q9NQS3 549 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 HRASLS2Q9NWW9 162 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 NDOR1Q9UHB4 597 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 NDRG2Q9UN36 371 aaKnown RBP21.71■■□□□ 1.07
VPS16-201ENST00000380443 FANCMQ8IYD8 2048 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 CCDC88CQ9P219 2028 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 A0A1W2PPC4 97 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 TNFRSF10AO00220 468 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 SLC22A1O15245 554 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 GABARAPO95166 117 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 CTSKP43235 329 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 ALDH6A1Q02252 535 aaKnown RBP21.71■■□□□ 1.07
VPS16-201ENST00000380443 FUT5Q11128 374 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 FZD2Q14332 565 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 TBCEQ15813 527 aaPredicted RBP21.71■■□□□ 1.07
VPS16-201ENST00000380443 CDC73Q6P1J9 531 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 LINC00299Q6ZSB3 139 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 AHSA2Q719I0 299 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 OOSP2Q86WS3 158 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 VANGL1Q8TAA9 524 aaPredicted RBP21.71■■□□□ 1.07
VPS16-201ENST00000380443 TRUB1Q8WWH5 349 aaKnown RBP21.71■■□□□ 1.07
VPS16-201ENST00000380443 FNDC11Q9BVV2 318 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 AASSQ9UDR5 926 aa21.71■■□□□ 1.07
VPS16-201ENST00000380443 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 SH3PXD2BA1X283 911 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms