RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 TNFSF8P32971 234 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 GPR19Q15760 415 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 LINGO2Q7L985 606 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ZCCHC3Q9NUD5 404 aaKnown RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 SLC38A8A6NNN8 435 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 CDC40O60508 579 aaKnown RBP eCLIP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 TBC1D17Q9HA65 648 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 MCCC2Q9HCC0 563 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 PLOD3O60568 738 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 EIF1P41567 113 aaKnown RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 CLCNKAP51800 687 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 DPY19L2P2Q6ZN68 376 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ARMCX6Q7L4S7 300 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ELF4Q99607 663 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 TISP43B9A030 160 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF749O43361 778 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 BCL7AQ4VC05 210 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 LRRTM4Q86VH4 590 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 STOML3Q8TAV4 291 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 LRRC15Q8TF66 581 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 KLK14Q9P0G3 267 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 GABRB3P28472 473 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 TAS2R50P59544 299 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 PAN3Q58A45 887 aaKnown RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 GPR153Q6NV75 609 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 COQ10AQ96MF6 247 aa4.7□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF334Q9HCZ1 680 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-201ENST00000377861 CHADLQ6NUI6 762 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ADAMTSL4Q6UY14 1074 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 MKRN2Q9H000 416 aaKnown RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 MAN2B1O00754 1011 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 BANF1O75531 89 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 PMS2P2O95744 297 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 CCSMST1Q4G0I0 132 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 HBMQ6B0K9 141 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 PRSS55Q6UWB4 352 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 VN1R5Q7Z5H4 357 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 CALHM3Q86XJ0 350 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 NKAIN3Q8N8D7 197 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 FBXO7Q9Y3I1 522 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ANXA2P2A6NMY6 339 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 KCNK2O95069 426 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ANXA2P07355 339 aaKnown RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ATP5IP56385 69 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 RAB1AP62820 205 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 COL9A3Q14050 684 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 FRS2Q8WU20 508 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 FBLIM1Q8WUP2 373 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 PCDHGA4Q9Y5G9 962 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 NME4O00746 187 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SCAMP1O15126 338 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 GALTP07902 379 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ALPIP09923 528 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 CDH12P55289 794 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 EEF1A1P68104 462 aaKnown RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 EEF1A2Q05639 463 aaKnown RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 EEF1A1P5Q5VTE0 462 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 FUT10Q6P4F1 479 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 CD300LGQ6UXG3 332 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 OR2L5Q8NG80 312 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ELMOD3Q96FG2 381 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SCMH1Q96GD3 660 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ABRAXAS2Q15018 415 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SKA3Q8IX90 412 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 TRAPPC12Q8WVT3 735 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 MRPS24Q96EL2 167 aaKnown RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 PRAP1Q96NZ9 151 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 XKR8Q9H6D3 395 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ELOVL2Q9NXB9 296 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 PSAT1Q9Y617 370 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 WRBO00258 174 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 PDGFAP04085 211 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 KCNA10Q16322 511 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 MFSD6LQ8IWD5 586 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ELMOD2Q8IZ81 293 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 METTL4Q8N3J2 472 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SPICQ8N5J4 248 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 OR5K3A6NET4 321 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 TNNI3P19429 210 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 BNIP3Q12983 259 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 TMEM221A6NGB7 291 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 AQP11Q8NBQ7 271 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 DHRS9Q9BPW9 319 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 NPIPA5A0A0B4J1W7 369 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 MEIOCA2RUB1 952 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 POLR2CP19387 275 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 CACNB2Q08289 660 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 CDADC1Q9BWV3 514 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SRMSQ9H3Y6 488 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ABLIM3O94929 683 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 TUBG1P23258 451 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 RAB31Q13636 194 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 MORN1Q5T089 497 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 TUBG2Q9NRH3 451 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 NAGAP17050 411 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 RAB3AP20336 220 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 CERS1P27544 350 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SWI5Q1ZZU3 235 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 MRPL41Q8IXM3 137 aaKnown RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 PTGES2Q9H7Z7 377 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms