RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 TMCC2O75069 709 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 CD79BP40259 229 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 WASP42768 502 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 PSPHP78330 225 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 ALDH6A1Q02252 535 aaKnown RBP17.11■□□□□ 0.33
SF1-203ENST00000377387 MEDAGQ5VYS4 303 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 UBE3DQ7Z6J8 389 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 LHFPL3Q86UP9 236 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 PROKR2Q8NFJ6 384 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 CXorf40AQ8TE69 158 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 ZG16BQ96DA0 208 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 RSPRY1Q96DX4 576 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 KIAA1671Q9BY89 1806 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 RPS25P62851 125 aaKnown RBP17.1■□□□□ 0.33
SF1-203ENST00000377387 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.1■□□□□ 0.33
SF1-203ENST00000377387 CRTC2Q53ET0 693 aaPredicted RBP17.1■□□□□ 0.33
SF1-203ENST00000377387 UBQLNLQ8IYU4 475 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 OR6F1Q8NGZ6 308 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 RGMAQ96B86 450 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 OTULINQ96BN8 352 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 TMCO6Q96DC7 493 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 ZNF582Q96NG8 517 aaPredicted RBP17.1■□□□□ 0.33
SF1-203ENST00000377387 FERD3LQ96RJ6 166 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 CFHR5Q9BXR6 569 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 C3orf14Q9HBI5 128 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 NDUFB11Q9NX14 153 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 MOSPD1Q9UJG1 213 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 ITGB1BP2Q9UKP3 347 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 FBXW2Q9UKT8 454 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 MRPS23Q9Y3D9 190 aaKnown RBP17.1■□□□□ 0.33
SF1-203ENST00000377387 C17orf113A0A1B0GUU1 675 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 HYKKA2RU49 373 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 IGLON5A6NGN9 336 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 PGRMC2O15173 223 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 ITGB7P26010 798 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 PPP2R1BP30154 601 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 SLAMF1Q13291 335 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 TBC1D19Q8N5T2 526 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 ZNF514Q96K75 400 aaPredicted RBP17.1■□□□□ 0.33
SF1-203ENST00000377387 TTYH2Q9BSA4 534 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 IMP3Q9NV31 184 aaKnown RBP17.1■□□□□ 0.33
SF1-203ENST00000377387 IRAK3Q9Y616 596 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 TRIOO75962 3097 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 FABP12A6NFH5 140 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 CHRM4P08173 479 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 RACK1P63244 317 aaKnown RBP17.1■□□□□ 0.33
SF1-203ENST00000377387 TOR1AIP1Q5JTV8 583 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 ZNF544Q6NX49 715 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 RAB43Q86YS6 212 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 MRPL43Q8N983 215 aaKnown RBP17.1■□□□□ 0.33
SF1-203ENST00000377387 LINC01555Q8NAE3 123 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 OR8K5Q8NH50 307 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 TM9SF4Q92544 642 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 COMMD3Q9UBI1 195 aa17.1■□□□□ 0.33
SF1-203ENST00000377387 TRANK1O15050 2925 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 SCN2AQ99250 2005 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 PCDH8O95206 1070 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 EPPINO95925 133 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 RB1P06400 928 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 LINC00271P0C7V0 271 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 MYL12AP19105 171 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 PYDC2Q56P42 97 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 FAM46CQ5VWP2 391 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 ZNF793Q6ZN11 406 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 LAPTM4BQ86VI4 370 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 TRIM48Q8IWZ4 208 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 C12orf76Q8N812 135 aaPredicted RBP17.09■□□□□ 0.33
SF1-203ENST00000377387 POF1BQ8WVV4 589 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 JPH3Q8WXH2 748 aaPredicted RBP17.09■□□□□ 0.33
SF1-203ENST00000377387 AMDHD1Q96NU7 426 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 SRRQ9GZT4 340 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 MAN2C1Q9NTJ4 1040 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 GPR34Q9UPC5 381 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 CPSF4LA6NMK7 179 aaKnown RBP17.09■□□□□ 0.33
SF1-203ENST00000377387 SEMA3DO95025 777 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 RAB36O95755 333 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 HMGN2P05204 90 aaKnown RBP17.09■□□□□ 0.33
SF1-203ENST00000377387 MSL3P1P0C860 447 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 ACP5P13686 325 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 MLLT11Q13015 90 aaPredicted RBP17.09■□□□□ 0.33
SF1-203ENST00000377387 TBRG1Q3YBR2 411 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 TMEM201Q5SNT2 666 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 PDZK1Q5T2W1 519 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 ABI3BPQ7Z7G0 1075 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 TP53I13Q8NBR0 393 aaPredicted RBP17.09■□□□□ 0.33
SF1-203ENST00000377387 OR5K2Q8NHB8 316 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 PHOX2BQ99453 314 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 SLC9A8Q9Y2E8 581 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 NTNG1Q9Y2I2 539 aa17.09■□□□□ 0.33
SF1-203ENST00000377387 TTC36A6NLP5 189 aa17.08■□□□□ 0.33
SF1-203ENST00000377387 KIAA0355O15063 1070 aa17.08■□□□□ 0.33
SF1-203ENST00000377387 CXCR2P25025 360 aa17.08■□□□□ 0.33
SF1-203ENST00000377387 DDX6P26196 483 aaKnown RBP eCLIP17.08■□□□□ 0.332e-7■■□□□ 12
SF1-203ENST00000377387 SOX18P35713 384 aa17.08■□□□□ 0.33
SF1-203ENST00000377387 GJA8P48165 433 aa17.08■□□□□ 0.33
SF1-203ENST00000377387 DUSP2Q05923 314 aa17.08■□□□□ 0.33
SF1-203ENST00000377387 ZNF234Q14588 700 aa17.08■□□□□ 0.33
SF1-203ENST00000377387 INSL4Q14641 139 aa17.08■□□□□ 0.33
SF1-203ENST00000377387 HNRNPA1L2Q32P51 320 aaKnown RBP17.08■□□□□ 0.33
SF1-203ENST00000377387 OR4C11Q6IEV9 310 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms