RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 HMGB4Q8WW32 186 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 OR2A14Q96R47 310 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 BTBD2Q9BX70 525 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 ANKRA2Q9H9E1 313 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 C11orf16Q9NQ32 467 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 CORINQ9Y5Q5 1042 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 H3BN98 237 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 TPST2O60704 377 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 SOX14O95416 240 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 STSP08842 583 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 UGT2B7P16662 529 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 POLR2CP19387 275 aaPredicted RBP19.03■□□□□ 0.64
VSX1-202ENST00000376709 YPEL5P62699 121 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 ST3GAL4Q11206 333 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 ILF3Q12906 894 aaKnown RBP eCLIP19.03■□□□□ 0.64
VSX1-202ENST00000376709 GPR18Q14330 331 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 FBXO42Q6P3S6 717 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 Q6ZSR6 202 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 ZCCHC10Q8TBK6 192 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 NT5CQ8TCD5 201 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 SLC7A13Q8TCU3 470 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 ABTB1Q969K4 478 aaPredicted RBP19.03■□□□□ 0.64
VSX1-202ENST00000376709 ELP4Q96EB1 424 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 PLEKHA8Q96JA3 519 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 FNDC11Q9BVV2 318 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 TRNAU1APQ9NX07 287 aaKnown RBP19.03■□□□□ 0.64
VSX1-202ENST00000376709 MMP17Q9ULZ9 603 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 A4GNTQ9UNA3 340 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 DSPPQ9NZW4 1301 aa19.03■□□□□ 0.64
VSX1-202ENST00000376709 A0A0G2JPF8 293 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 HNRNPCL2B2RXH8 293 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 HNRNPCL3B7ZW38 293 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 PFDN1O60925 122 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 HNRNPCL4P0DMR1 293 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 TARDBPQ13148 414 aaKnown RBP eCLIP19.02■□□□□ 0.64
VSX1-202ENST00000376709 CCINQ13939 588 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 CEBPEQ15744 281 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 SYT16Q17RD7 645 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 C16orf87Q6PH81 154 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 FAM46DQ8NEK8 389 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 B3GNT7Q8NFL0 401 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 FLVCR1-AS1Q8TAF5 88 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 KAT2AQ92830 837 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 ZNF681Q96N22 645 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 OR7D2Q96RA2 312 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 CLN6Q9NWW5 311 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 KCNE3Q9Y6H6 103 aa19.02■□□□□ 0.64
VSX1-202ENST00000376709 OR6C74A6NCV1 312 aa19.02■□□□□ 0.63
VSX1-202ENST00000376709 SEMA4FO95754 770 aa19.02■□□□□ 0.63
VSX1-202ENST00000376709 TGFBR2P37173 567 aa19.02■□□□□ 0.63
VSX1-202ENST00000376709 NCS1P62166 190 aa19.02■□□□□ 0.63
VSX1-202ENST00000376709 SUZ12Q15022 739 aaKnown RBP19.02■□□□□ 0.63
VSX1-202ENST00000376709 LTB4RQ15722 352 aa19.02■□□□□ 0.63
VSX1-202ENST00000376709 TIGD6Q17RP2 521 aa19.02■□□□□ 0.63
VSX1-202ENST00000376709 DEFB134Q4QY38 66 aa19.02■□□□□ 0.63
VSX1-202ENST00000376709 PGBD2Q6P3X8 592 aa19.02■□□□□ 0.63
VSX1-202ENST00000376709 KLHL25Q9H0H3 589 aa19.02■□□□□ 0.63
VSX1-202ENST00000376709 QRSL1Q9H0R6 528 aaKnown RBP19.02■□□□□ 0.63
VSX1-202ENST00000376709 POLR2J3Q9H1A7 115 aaKnown RBP19.02■□□□□ 0.63
VSX1-202ENST00000376709 REV1Q9UBZ9 1251 aa19.02■□□□□ 0.63
VSX1-202ENST00000376709 A0A1W2PRQ8 180 aa19.01■□□□□ 0.63
VSX1-202ENST00000376709 CASC3O15234 703 aaKnown RBP19.01■□□□□ 0.63
VSX1-202ENST00000376709 CTSVO60911 334 aa19.01■□□□□ 0.63
VSX1-202ENST00000376709 NME6O75414 186 aaPredicted RBP19.01■□□□□ 0.63
VSX1-202ENST00000376709 CPN2P22792 545 aa19.01■□□□□ 0.63
VSX1-202ENST00000376709 OR6T1Q8NGN1 323 aa19.01■□□□□ 0.63
VSX1-202ENST00000376709 FAM3CQ92520 227 aa19.01■□□□□ 0.63
VSX1-202ENST00000376709 RPL3LQ92901 407 aaKnown RBP19.01■□□□□ 0.63
VSX1-202ENST00000376709 SLC38A4Q969I6 547 aa19.01■□□□□ 0.63
VSX1-202ENST00000376709 COL26A1Q96A83 441 aa19.01■□□□□ 0.63
VSX1-202ENST00000376709 OR2A5Q96R48 311 aa19.01■□□□□ 0.63
VSX1-202ENST00000376709 ROGDIQ9GZN7 287 aa19.01■□□□□ 0.63
VSX1-202ENST00000376709 ACTR10Q9NZ32 417 aa19.01■□□□□ 0.63
VSX1-202ENST00000376709 NDRG2Q9UN36 371 aaKnown RBP19.01■□□□□ 0.63
VSX1-202ENST00000376709 SH3D21A4FU49 640 aa19■□□□□ 0.63
VSX1-202ENST00000376709 CLDN24A6NM45 220 aa19■□□□□ 0.63
VSX1-202ENST00000376709 TLR4O00206 839 aa19■□□□□ 0.63
VSX1-202ENST00000376709 LGI1O95970 557 aa19■□□□□ 0.63
VSX1-202ENST00000376709 LIPAP38571 399 aa19■□□□□ 0.63
VSX1-202ENST00000376709 OPRL1P41146 370 aa19■□□□□ 0.63
VSX1-202ENST00000376709 TNFRSF17Q02223 184 aa19■□□□□ 0.63
VSX1-202ENST00000376709 ILKQ13418 452 aa19■□□□□ 0.63
VSX1-202ENST00000376709 DGUOKQ16854 277 aa19■□□□□ 0.63
VSX1-202ENST00000376709 ATAD3BQ5T9A4 648 aa19■□□□□ 0.63
VSX1-202ENST00000376709 ZNF675Q8TD23 568 aa19■□□□□ 0.63
VSX1-202ENST00000376709 IL4I1Q96RQ9 567 aa19■□□□□ 0.63
VSX1-202ENST00000376709 DNAAF2Q9NVR5 837 aaKnown RBP19■□□□□ 0.63
VSX1-202ENST00000376709 PHF11Q9UIL8 331 aa19■□□□□ 0.63
VSX1-202ENST00000376709 URADA6NGE7 173 aa19■□□□□ 0.63
VSX1-202ENST00000376709 TOR1BO14657 336 aa19■□□□□ 0.63
VSX1-202ENST00000376709 P2RX6O15547 441 aa19■□□□□ 0.63
VSX1-202ENST00000376709 SERPINB10P48595 397 aa19■□□□□ 0.63
VSX1-202ENST00000376709 XKP51811 444 aa19■□□□□ 0.63
VSX1-202ENST00000376709 SNRPNP63162 240 aaKnown RBP19■□□□□ 0.63
VSX1-202ENST00000376709 PRAMEF8Q5VWM4 474 aa19■□□□□ 0.63
VSX1-202ENST00000376709 PRAMEF7Q5VXH5 474 aa19■□□□□ 0.63
VSX1-202ENST00000376709 PODNL1Q6PEZ8 512 aa19■□□□□ 0.63
VSX1-202ENST00000376709 FIGLAQ6QHK4 219 aa19■□□□□ 0.63
VSX1-202ENST00000376709 C16orf62Q7Z3J2 963 aa19■□□□□ 0.63
VSX1-202ENST00000376709 LRRC25Q8N386 305 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms