RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 ATG16L1Q676U5 607 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 PDPK2PQ6A1A2 396 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 C8orf74Q6P047 294 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 GUSBP11Q6P575 273 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 LRRC8BQ6P9F7 803 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 AFTPHQ6ULP2 937 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 TAS2R42Q7RTR8 314 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 SNX20Q7Z614 316 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 LDB1Q86U70 411 aaPredicted RBP4.18□□□□□ -1.74
PMS1-202ENST00000374826 LRRTM4Q86VH4 590 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 GKN2Q86XP6 184 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 NRROSQ86YC3 692 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 SLC35F3Q8IY50 421 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 PIANPQ8IYJ0 282 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 OTUD6BQ8N6M0 293 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 RASGEF1AQ8N9B8 481 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 NAT8LQ8N9F0 302 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 MCUQ8NE86 351 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 DDHD1Q8NEL9 900 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 TNIP2Q8NFZ5 429 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 OR4C6Q8NH72 309 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 KIF18AQ8NI77 898 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 CREB3L4Q8TEY5 395 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 PATE1Q8WXA2 126 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 ELP4Q96EB1 424 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 SNF8Q96H20 258 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 CDKN2AIPNLQ96HQ2 116 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 TBATAQ96M53 351 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 RUNDC3BQ96NL0 473 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 SERPINB12Q96P63 405 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 VPS35Q96QK1 796 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 NODALQ96S42 347 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 RANBP9Q96S59 729 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 CSF3RQ99062 836 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 GSDMCQ9BYG8 508 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 IL22Q9GZX6 179 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 DPEP2Q9H4A9 486 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 SYNDIG1Q9H7V2 258 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 XAB2Q9HCS7 855 aaKnown RBP4.18□□□□□ -1.74
PMS1-202ENST00000374826 NOX4Q9NPH5 578 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 SMYD2Q9NRG4 433 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 SNTG1Q9NSN8 517 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 NLE1Q9NVX2 485 aaPredicted RBP4.18□□□□□ -1.74
PMS1-202ENST00000374826 SMOXQ9NWM0 555 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 NLGN3Q9NZ94 848 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 BFARQ9NZS9 450 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 TAAR2Q9P1P5 351 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 VPS18Q9P253 973 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 MARCH4Q9P2E8 410 aaPredicted RBP4.18□□□□□ -1.74
PMS1-202ENST00000374826 RNF14Q9UBS8 474 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 CTNNAL1Q9UBT7 734 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 APPL1Q9UKG1 709 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 GPR34Q9UPC5 381 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 CHMP2BQ9UQN3 213 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 CARD8Q9Y2G2 431 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 GPR52Q9Y2T5 361 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 SNX24Q9Y343 169 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 MAD1L1Q9Y6D9 718 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 U3KQA8 63 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 CNTRLQ7Z7A1 2325 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 EML6Q6ZMW3 1958 aa4.18□□□□□ -1.74
PMS1-202ENST00000374826 TNRC6AQ8NDV7 1962 aaKnown RBP4.18□□□□□ -1.74
PMS1-202ENST00000374826 NOTCH3Q9UM47 2321 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 FRYQ5TBA9 3013 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 TRBV5-4A0A0C4DH59 114 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 MED19A0JLT2 244 aaPredicted RBP4.17□□□□□ -1.74
PMS1-202ENST00000374826 AGAP14A8MT82 685 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 PDZK1P1A8MUH7 402 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 HNRNPCL2B2RXH8 293 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 H7C0S8 307 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 CHUKO15111 745 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 TNFSF14O43557 240 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 VEGFDO43915 354 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 KLK8O60259 260 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 OR1I1O60431 355 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 PEX14O75381 377 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 SEC31AO94979 1220 aaKnown RBP4.17□□□□□ -1.74
PMS1-202ENST00000374826 VAPBO95292 243 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 EML2O95834 649 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 CEACAM1P13688 526 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 CKMT2P17540 419 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 AMD1P17707 334 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 MSH3P20585 1137 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 EDN2P20800 178 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 IVDP26440 423 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 MAGEA3P43357 314 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 NPY2RP49146 381 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 DRG2P55039 364 aaKnown RBP4.17□□□□□ -1.74
PMS1-202ENST00000374826 SARNPP82979 210 aaKnown RBP4.17□□□□□ -1.74
PMS1-202ENST00000374826 ACSM2AQ08AH3 577 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 TMEM115Q12893 351 aaPredicted RBP4.17□□□□□ -1.74
PMS1-202ENST00000374826 ITGADQ13349 1161 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 NFE2L1Q14494 772 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 FASTKD3Q14CZ7 662 aaKnown RBP4.17□□□□□ -1.74
PMS1-202ENST00000374826 MORF4L2Q15014 288 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 TAF11Q15544 211 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 TRADDQ15628 312 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 WHAMMP3Q1A5X7 153 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 AMZ1Q400G9 498 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 C14orf28Q4W4Y0 310 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms