RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 NUP188Q5SRE5 1749 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 IFNA4P05014 189 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 DNASE1P24855 282 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 RAB15P59190 212 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 ZNF367Q7RTV3 350 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 PRR18Q8N4B5 295 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 RCBTB1Q8NDN9 531 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 CPEB1Q9BZB8 566 aaKnown RBP13.66□□□□□ -0.22
TRAF1-201ENST00000373887 ERVK13-1Q9NX77 482 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 PCTPQ9UKL6 214 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 ZNF254O75437 659 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 ALDH3B1P43353 468 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 SLC10A2Q12908 348 aaPredicted RBP13.66□□□□□ -0.22
TRAF1-201ENST00000373887 PPP1R3AQ16821 1122 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 C2CD4AQ8NCU7 369 aaPredicted RBP13.66□□□□□ -0.22
TRAF1-201ENST00000373887 RAB7BQ96AH8 199 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 RADILQ96JH8 1075 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 SEC14L4Q9UDX3 406 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 ZNF705FA8MVS1 300 aaPredicted RBP13.66□□□□□ -0.22
TRAF1-201ENST00000373887 ZNF705DP0CH99 300 aaPredicted RBP13.66□□□□□ -0.22
TRAF1-201ENST00000373887 ZNF705BP0CI00 300 aaPredicted RBP13.66□□□□□ -0.22
TRAF1-201ENST00000373887 ADRB3P13945 408 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 GGT2P36268 569 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 ZNF136P52737 540 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 OR4D2P58180 307 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 CYP4V2Q6ZWL3 525 aaPredicted RBP13.66□□□□□ -0.22
TRAF1-201ENST00000373887 PSD4Q8NDX1 1056 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 DENND1AQ8TEH3 1009 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 NSUN5Q96P11 429 aaKnown RBP13.66□□□□□ -0.22
TRAF1-201ENST00000373887 PPIL3Q9H2H8 161 aaKnown RBP13.66□□□□□ -0.22
TRAF1-201ENST00000373887 IRF2P14316 349 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 POLR2HP52434 150 aaKnown RBP13.66□□□□□ -0.22
TRAF1-201ENST00000373887 REEP3Q6NUK4 255 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 FAM180BQ6P0A1 224 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 TUBA1CQ9BQE3 449 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 MROQ9BYG7 248 aa13.66□□□□□ -0.22
TRAF1-201ENST00000373887 PAQR5Q9NXK6 330 aaPredicted RBP13.66□□□□□ -0.22
TRAF1-201ENST00000373887 A8MVJ9 347 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 HHLA1C9JL84 531 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 FOXD2O60548 495 aaPredicted RBP13.65□□□□□ -0.22
TRAF1-201ENST00000373887 IFNA10P01566 189 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 PRKCAP17252 672 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 CD53P19397 219 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 HK3P52790 923 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 SNRPD2P62316 118 aaKnown RBP13.65□□□□□ -0.22
TRAF1-201ENST00000373887 FOXK1P85037 733 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 TRIM46Q7Z4K8 759 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 ZSWIM9Q86XI8 627 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 KRTCAP2Q8N6L1 136 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 ASCC1Q8N9N2 400 aaKnown RBP13.65□□□□□ -0.22
TRAF1-201ENST00000373887 OR4D6Q8NGJ1 314 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 DPH7Q9BTV6 452 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 A0A1W2PP18 115 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 MPPED1O15442 326 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 FMO6PO60774 539 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 PEX14O75381 377 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 ZNF821O75541 412 aaPredicted RBP13.65□□□□□ -0.22
TRAF1-201ENST00000373887 C5AR1P21730 350 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 ADH6P28332 368 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 NTRK2Q16620 822 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 LRRC26Q2I0M4 334 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 ZNF674Q2M3X9 581 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 C18orf21Q32NC0 220 aaPredicted RBP13.65□□□□□ -0.22
TRAF1-201ENST00000373887 SFRP4Q6FHJ7 346 aaPredicted RBP13.65□□□□□ -0.22
TRAF1-201ENST00000373887 KLBQ86Z14 1044 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 PLD6Q8N2A8 252 aaKnown RBP13.65□□□□□ -0.22
TRAF1-201ENST00000373887 FRZBQ92765 325 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 PEX11GQ96HA9 241 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 MYNNQ9NPC7 610 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 HAO2Q9NYQ3 351 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 CHMP24386 653 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 DPP6P42658 865 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 MAP2K3P46734 347 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 SLAMF1Q13291 335 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 LILRB2Q8N423 598 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 DEFB126Q9BYW3 111 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 ZDHHC18Q9NUE0 388 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 SUSD2Q9UGT4 822 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 SH3BGRL2Q9UJC5 107 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 OR8U9P0C7N5 309 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 HOXB9P17482 250 aaPredicted RBP13.65□□□□□ -0.22
TRAF1-201ENST00000373887 AKR1C2P52895 323 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 CTBP2P56545 445 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 TBPL1P62380 186 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 RAET1LQ5VY80 246 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 COMMD7Q86VX2 200 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 TAS2R9Q9NYW1 312 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 ADAM18Q9Y3Q7 739 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 NWD2Q9ULI1 1742 aa13.65□□□□□ -0.22
TRAF1-201ENST00000373887 RGS9O75916 674 aaPredicted RBP13.65□□□□□ -0.23
TRAF1-201ENST00000373887 PFKLP17858 780 aa13.65□□□□□ -0.23
TRAF1-201ENST00000373887 UQCRC2P22695 453 aa13.65□□□□□ -0.23
TRAF1-201ENST00000373887 PLEKHS1Q5SXH7 462 aa13.65□□□□□ -0.23
TRAF1-201ENST00000373887 TMEM151BQ8IW70 566 aa13.65□□□□□ -0.23
TRAF1-201ENST00000373887 ZNF100Q8IYN0 542 aa13.65□□□□□ -0.23
TRAF1-201ENST00000373887 CSNK1A1LQ8N752 337 aa13.65□□□□□ -0.23
TRAF1-201ENST00000373887 TEX19Q8NA77 164 aa13.65□□□□□ -0.23
TRAF1-201ENST00000373887 OR4K14Q8NGD5 310 aa13.65□□□□□ -0.23
TRAF1-201ENST00000373887 SGCZQ96LD1 299 aa13.65□□□□□ -0.23
TRAF1-201ENST00000373887 TEX264Q9Y6I9 313 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms