RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 DVL2O14641 736 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 NPC1O15118 1278 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 FABP7O15540 132 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 HCN1O60741 890 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 FAM157BP0CG42 384 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 ICAM2P13598 275 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 HOXD10P28358 340 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 PKLRP30613 574 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 AGFG1P52594 562 aaKnown RBP12.95□□□□□ -0.34
USP49-201ENST00000373006 PPP3R1P63098 170 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 ESCO2Q56NI9 601 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 TECPR1Q7Z6L1 1165 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 IQCHQ86VS3 1027 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 SLC30A8Q8IWU4 369 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 FAM26EQ8N5C1 309 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 OR56A3Q8NH54 315 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 OVCA2Q8WZ82 227 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 C17orf62Q9BQA9 187 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 PRR14Q9BWN1 585 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 PLA2G12AQ9BZM1 189 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 EGLN3Q9H6Z9 239 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 DMRT3Q9NQL9 472 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 SEC14L3Q9UDX4 400 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 ORC5O43913 435 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 SOX9P48436 509 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 EVX1P49640 407 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 CLDN20P56880 219 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 CAP1Q01518 475 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 MAP4K2Q12851 820 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 PDE7AQ13946 482 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 SLC8B1Q6J4K2 584 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 Q6ZVU0 165 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 DNAJB7Q7Z6W7 309 aaPredicted RBP12.95□□□□□ -0.34
USP49-201ENST00000373006 CMTM8Q8IZV2 173 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 AUTS2Q8WXX7 1259 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 UFD1Q92890 307 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 C19orf43Q9BQ61 176 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 TMEM43Q9BTV4 400 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 GTPBP2Q9BX10 602 aaKnown RBP12.95□□□□□ -0.34
USP49-201ENST00000373006 HDHD2Q9H0R4 259 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 GLTPQ9NZD2 209 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 PLXNB3Q9ULL4 1909 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 PIPSLA2A3N6 862 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 MANSC4A6NHS7 340 aaPredicted RBP12.95□□□□□ -0.34
USP49-201ENST00000373006 PROM1O43490 865 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 PDGFAP04085 211 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 CELP19835 753 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 SSTR2P30874 369 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 MANFP55145 182 aaKnown RBP12.95□□□□□ -0.34
USP49-201ENST00000373006 RAB8AP61006 207 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 CSTF1Q05048 431 aaKnown RBP12.95□□□□□ -0.34
USP49-201ENST00000373006 ZNF284Q2VY69 593 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 CLEC12AQ5QGZ9 265 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 QSOX2Q6ZRP7 698 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 ZNF767PQ75MW2 155 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 RASGEF1AQ8N9B8 481 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 TMEM163Q8TC26 289 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 KIAA1143Q96AT1 154 aaPredicted RBP12.95□□□□□ -0.34
USP49-201ENST00000373006 ATF6BQ99941 703 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 MARVELD1Q9BSK0 173 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 ZSCAN32Q9NX65 697 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 YIPF1Q9Y548 306 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 CD8B2A6NJW9 211 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 PRRG1O14668 218 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 NTN1O95631 604 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 CD8BP10966 210 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 ZNF30P17039 623 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 UQCRC2P22695 453 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 MLLT1Q03111 559 aaPredicted RBP12.94□□□□□ -0.34
USP49-201ENST00000373006 GPR68Q15743 365 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 SYPL1Q16563 259 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 SPOUT1Q5T280 376 aaKnown RBP12.94□□□□□ -0.34
USP49-201ENST00000373006 PCSK9Q8NBP7 692 aaKnown RBP12.94□□□□□ -0.34
USP49-201ENST00000373006 OR4K5Q8NGD3 323 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 ECHDC3Q96DC8 303 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 POLDIP3Q9BY77 421 aaKnown RBP12.94□□□□□ -0.34
USP49-201ENST00000373006 FBXW2Q9UKT8 454 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 USP34Q70CQ2 3546 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 CH25HO95992 272 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 PTGER1P34995 402 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 SUZ12Q15022 739 aaKnown RBP12.94□□□□□ -0.34
USP49-201ENST00000373006 MARCH9Q86YJ5 346 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 OR4M2Q8NGB6 313 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 MRPS31Q92665 395 aaKnown RBP12.94□□□□□ -0.34
USP49-201ENST00000373006 AKAP1Q92667 903 aaKnown RBP eCLIP12.94□□□□□ -0.34
USP49-201ENST00000373006 TMEM169Q96HH4 297 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 TEFMQ96QE5 360 aaKnown RBP12.94□□□□□ -0.34
USP49-201ENST00000373006 CLCA2Q9UQC9 943 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 PCDHGB7Q9Y5F8 929 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 MYOFQ9NZM1 2061 aa12.94□□□□□ -0.34
USP49-201ENST00000373006 LANCL1O43813 399 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 B4GALT2O60909 372 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 PAHP00439 452 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 GJA1P17302 382 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 GAS1P54826 345 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 ELAVL2Q12926 359 aaKnown RBP12.93□□□□□ -0.34
USP49-201ENST00000373006 ANKRD54Q6NXT1 300 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 C22orf39Q6P5X5 142 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 RNF180Q86T96 592 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 SLC51BQ86UW2 128 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms