RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 EFNB3Q15768 340 aa5.34□□□□□ -1.55
CDC42SE2-201ENST00000360515 EIPR1Q53HC9 387 aa5.34□□□□□ -1.55
CDC42SE2-201ENST00000360515 EXOSC6Q5RKV6 272 aaKnown RBP5.34□□□□□ -1.55
CDC42SE2-201ENST00000360515 AGAP6Q5VW22 663 aa5.34□□□□□ -1.55
CDC42SE2-201ENST00000360515 VWA1Q6PCB0 445 aa5.34□□□□□ -1.55
CDC42SE2-201ENST00000360515 PLD3Q8IV08 490 aa5.34□□□□□ -1.55
CDC42SE2-201ENST00000360515 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.34□□□□□ -1.55
CDC42SE2-201ENST00000360515 FAM169BQ8N8A8 192 aa5.34□□□□□ -1.55
CDC42SE2-201ENST00000360515 OR1J4Q8NGS1 313 aa5.34□□□□□ -1.55
CDC42SE2-201ENST00000360515 CALML6Q8TD86 181 aa5.34□□□□□ -1.55
CDC42SE2-201ENST00000360515 KCNK17Q96T54 332 aa5.34□□□□□ -1.55
CDC42SE2-201ENST00000360515 MAPRE3Q9UPY8 281 aa5.34□□□□□ -1.55
CDC42SE2-201ENST00000360515 CFL2Q9Y281 166 aa5.34□□□□□ -1.55
CDC42SE2-201ENST00000360515 ASB4Q9Y574 426 aa5.34□□□□□ -1.55
CDC42SE2-201ENST00000360515 POM121CA8CG34 1229 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 EEF1E1-BLOC1S5C9J1V9 151 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 EEF1E1O43324 174 aaKnown RBP5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 OR1F1O43749 312 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 ATP1B1P05026 303 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 PYGBP11216 843 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 COX7A2P14406 83 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 PLIN5Q00G26 463 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 HMGCS1Q01581 520 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 GABPB1Q06547 395 aaPredicted RBP5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 BMPR2Q13873 1038 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 CTU2Q2VPK5 515 aaKnown RBP5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 MFSD4BQ5TF39 518 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 SLC29A4Q7RTT9 530 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 KIAA1328Q86T90 577 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 PLCZ1Q86YW0 608 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 PPFIBP2Q8ND30 876 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 CFAP61Q8NHU2 1237 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 PRR14Q9BWN1 585 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 OSBPL11Q9BXB4 747 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 PIF1Q9H611 641 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 CHRAC1Q9NRG0 131 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 PROCRQ9UNN8 238 aa5.34□□□□□ -1.56
CDC42SE2-201ENST00000360515 SLC22A20A6NK97 555 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 UGDHO60701 494 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 PRKRAO75569 313 aaKnown RBP5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 BCAS2O75934 225 aaPredicted RBP5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 PSMG1O95456 288 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 CCDC175P0C221 793 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 ITGA2P17301 1181 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 CDKN1AP38936 164 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 PPOXP50336 477 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 EFR3AQ14156 821 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 MMEL1Q495T6 779 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 Q6ZSR9 355 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 PTCD3Q96EY7 689 aaKnown RBP5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 PLPPR2Q96GM1 343 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 DOHHQ9BU89 302 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 EFCAB11Q9BUY7 163 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 PNO1Q9NRX1 252 aaKnown RBP5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 ABHD10Q9NUJ1 306 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 SPEF1Q9Y4P9 236 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 EPN1Q9Y6I3 576 aaPredicted RBP5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.33□□□□□ -1.562e-7■□□□□ 8.1
CDC42SE2-201ENST00000360515 DNAJC13O75165 2243 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 CTAGE15A4D2H0 777 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 GOLGA6L9A6NEM1 432 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 TTC36A6NLP5 189 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 SEMA3DO95025 777 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 GPR75O95800 540 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 SSR1P43307 286 aaKnown RBP5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 RGS4P49798 205 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 CDH15P55291 814 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 KCNJ2P63252 427 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 CUL3Q13618 768 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 CSHL1Q14406 222 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 CCDC181Q5TID7 509 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 CTAGE6Q86UF2 777 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 SERPINB12Q96P63 405 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 FAM167BQ9BTA0 163 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 ACAT2Q9BWD1 397 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 RBCK1Q9BYM8 510 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 CXorf21Q9HAI6 301 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 BCO1Q9HAY6 547 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 CRNNQ9UBG3 495 aaPredicted RBP5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 CES1P1Q9UKY3 287 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 ABCA4P78363 2273 aa5.33□□□□□ -1.56
CDC42SE2-201ENST00000360515 DNAJA2O60884 412 aa5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 FZD7O75084 574 aa5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 HKR1P10072 659 aa5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 PPICP45877 212 aa5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 PNLIPRP2P54317 469 aa5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 WNT3P56703 355 aa5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 MRPS11P82912 194 aaKnown RBP5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 FAM111BQ6SJ93 734 aa5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 RNF111Q6ZNA4 994 aa5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 DGAT2L6Q6ZPD8 337 aa5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 C1QL2Q7Z5L3 287 aa5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 THOC6Q86W42 341 aaKnown RBP5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 ZNF610Q8N9Z0 462 aa5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 SREK1Q8WXA9 508 aaKnown RBP5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 ALG3Q92685 438 aa5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 JMJD8Q96S16 334 aa5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 MED18Q9BUE0 208 aa5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 PRDM13Q9H4Q3 707 aa5.32□□□□□ -1.56
CDC42SE2-201ENST00000360515 NHEJ1Q9H9Q4 299 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms