RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 KLHL21Q9UJP4 597 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 ANHXE9PGG2 379 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 PLSCR1O15162 318 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 PAHP00439 452 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 RETP07949 1114 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 PITPNBP48739 271 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 KCTD13Q8WZ19 329 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 MAL2Q969L2 176 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 ARHGAP9Q9BRR9 750 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 CCM2LQ9NUG4 571 aaPredicted RBP15.31■□□□□ 0.04
COL18A1-203ENST00000359759 B4GALT6Q9UBX8 382 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 ADAM18Q9Y3Q7 739 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 SLC1A7O00341 560 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 SEC14L5O43304 696 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 TSPAN6O43657 245 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 ALDOBP05062 364 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 HNF1BP35680 557 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 LIPJQ5W064 366 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 SUSD3Q96L08 255 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 TGM7Q96PF1 710 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 TFP02787 698 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 CD1DP15813 335 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 CSNK2A1P68400 391 aaPredicted RBP15.31■□□□□ 0.04
COL18A1-203ENST00000359759 HACD2Q6Y1H2 254 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 KCTD20Q7Z5Y7 419 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 ZNF100Q8IYN0 542 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 CSNK2A3Q8NEV1 391 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 TMEM234Q8WY98 164 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 BORCS7Q96B45 105 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 IL17FQ96PD4 163 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 CACNG6Q9BXT2 260 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 TMEM248Q9NWD8 314 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 SMOXQ9NWM0 555 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 GXYLT2A0PJZ3 443 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 HPRP00739 348 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 CDK2P24941 298 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 CAV2P51636 162 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 OR4D2P58180 307 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 SSTP61278 116 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 GALNT2Q10471 571 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 MALLQ13021 153 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 ASPGQ86U10 573 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 CHDHQ8NE62 594 aaPredicted RBP15.31■□□□□ 0.04
COL18A1-203ENST00000359759 DDX1Q92499 740 aaKnown RBP15.31■□□□□ 0.04
COL18A1-203ENST00000359759 C11orf84Q9BUA3 381 aaPredicted RBP15.31■□□□□ 0.04
COL18A1-203ENST00000359759 A0A1W2PQL4 384 aaPredicted RBP15.3■□□□□ 0.04
COL18A1-203ENST00000359759 HOXB9P17482 250 aaPredicted RBP15.3■□□□□ 0.04
COL18A1-203ENST00000359759 MSR1P21757 451 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 FBLP22087 321 aaKnown RBP15.3■□□□□ 0.04
COL18A1-203ENST00000359759 EOGTQ5NDL2 527 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 PM20D2Q8IYS1 436 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 TRAM1L1Q8N609 369 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 F2RL3Q96RI0 385 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 SGIP1Q9BQI5 828 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 SDHDO14521 159 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 YY2O15391 372 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 HTR3BO95264 441 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 LIPCP11150 499 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 IRF2P14316 349 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 BDKRB2P30411 391 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 HTD2P86397 168 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 RADILQ96JH8 1075 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 HTR1EP28566 365 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 GATMP50440 423 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 CDKN2DP55273 166 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 C2orf76Q3KRA6 126 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 DCST2Q5T1A1 773 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 PNCKQ6P2M8 343 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 PQLC3Q8N755 202 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 SGTBQ96EQ0 304 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 METTL2AQ96IZ6 378 aaKnown RBP15.3■□□□□ 0.04
COL18A1-203ENST00000359759 TEX10Q9NXF1 929 aaPredicted RBP15.3■□□□□ 0.04
COL18A1-203ENST00000359759 TRAV18A0A075B6X5 111 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 C2orf74A8MZ97 194 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 F5H5P2 479 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 LEFTY2O00292 366 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 OIP5O43482 229 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 FAM189A1O60320 539 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 GALTP07902 379 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 JMJD7P0C870 316 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 GPR143P51810 404 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 POU4F2Q12837 409 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 RNASE10Q5GAN6 216 aaKnown RBP15.3■□□□□ 0.04
COL18A1-203ENST00000359759 SLC35F5Q8WV83 523 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 TOMM40LQ969M1 308 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 ZNF382Q96SR6 550 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 MINDY3Q9H8M7 445 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 NCDNQ9UBB6 729 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 RABL2AQ9UBK7 228 aaPredicted RBP15.3■□□□□ 0.04
COL18A1-203ENST00000359759 ACRV1P26436 265 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 PRKAR1BP31321 381 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 RGS6P49758 472 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 PSPHP78330 225 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 KCNC3Q14003 757 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 IER5LQ5T953 404 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 RRNAD1Q96FB5 475 aaKnown RBP15.3■□□□□ 0.04
COL18A1-203ENST00000359759 ZNF681Q96N22 645 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 FOLH1BQ9HBA9 442 aa15.3■□□□□ 0.04
COL18A1-203ENST00000359759 EMC8O43402 210 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 PRAMEF11O60813 436 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms