RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 TM4SF1P30408 202 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 HNF1BP35680 557 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 HOXA1P49639 335 aaPredicted RBP6.27□□□□□ -1.41
TRIM38-201ENST00000357085 OLIG2Q13516 323 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 BOP1Q14137 746 aaKnown RBP6.27□□□□□ -1.41
TRIM38-201ENST00000357085 TMEM65Q6PI78 240 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 GGHQ92820 318 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 SENP8Q96LD8 212 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 ZFP3Q96NJ6 502 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 PRRT1Q99946 306 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 CPPED1Q9BRF8 314 aaPredicted RBP6.27□□□□□ -1.41
TRIM38-201ENST00000357085 EXO5Q9H790 373 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 SLAMF7Q9NQ25 335 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 A0A1B0GVC2 190 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 OR2AG2A6NM03 316 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 BCL2L1Q07817 233 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 SPANXN4Q5MJ08 99 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 DUSP18Q8NEJ0 188 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 MYOCQ99972 504 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 AIF1LQ9BQI0 150 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 UFSP2Q9NUQ7 469 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 LOC102723532A0A0G2JNH3 316 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 CST3P01034 146 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 MAOAP21397 527 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 CCR7P32248 378 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 SOWAHAQ2M3V2 549 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 LINGO2Q7L985 606 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 NETO1Q8TDF5 533 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 CNN2Q99439 309 aaKnown RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 PCYT2Q99447 389 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 P2RX7Q99572 595 aaKnown RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 B3GNT4Q9C0J1 378 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 LMAN2LQ9H0V9 348 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 TBC1D24Q9ULP9 559 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 CKAP5Q14008 2032 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 GGT3PA6NGU5 568 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 CBX4O00257 560 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 ALDH1A1P00352 501 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 ACSM4P0C7M7 580 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 RPIAP49247 311 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 STK19P49842 368 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 CRYBB1P53674 252 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 LILRA4P59901 499 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 TRA2BP62995 288 aaKnown RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 ST3GAL3Q11203 375 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 CHRNA6Q15825 494 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 EXOC3L2Q2M3D2 409 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 FAM209BQ5JX69 171 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 CDH26Q8IXH8 852 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 OR6J1Q8NGC5 347 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 FUBP1Q96AE4 644 aaKnown RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 ZNF668Q96K58 619 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 PKMYT1Q99640 499 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 CIPCQ9C0C6 399 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 SGK2Q9HBY8 427 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 TMEM14AQ9Y6G1 99 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 H7C1Q1 480 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 ARHGAP33O14559 1287 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 SIGLEC6O43699 453 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 FGF19O95750 216 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 HTR1AP08908 422 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 TIA1P31483 386 aaKnown RBP eCLIP6.26□□□□□ -1.413e-6■■■■□ 20.5
TRIM38-201ENST00000357085 CTAG1AP78358 180 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 MAPK14Q16539 360 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 NOMO2Q5JPE7 1267 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 SIRPB2Q5JXA9 342 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 MBOAT1Q6ZNC8 495 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 PIM3Q86V86 326 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 ZNF454Q8N9F8 522 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 OR10Q1Q8NGQ4 319 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 FAM110BQ8TC76 370 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 EDAQ92838 391 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 MARVELD1Q9BSK0 173 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 ZFYVE1Q9HBF4 777 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 SMCO4Q9NRQ5 59 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 TRAV19A0A0A6YYK7 116 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 BORCS7-ASMTA0A0B4J1R7 106 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 SMIM28A0A1B0GU29 152 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 CBLP22681 906 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 S100A11P31949 105 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 RNF144AP50876 292 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 FCN2Q15485 313 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 XKR4Q5GH76 650 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 CBARPQ8N350 705 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 ZSCAN1Q8NBB4 408 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 TTPALQ9BTX7 342 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 DNAJC27Q9NZQ0 273 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 HMSDA8MTL9 139 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 F5H5P2 479 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 GPX2P18283 190 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 VSX2P58304 361 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 SLC6A19Q695T7 634 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 PDZD3Q86UT5 571 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 OR52N2Q8NGI0 321 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 ZNF583Q96ND8 569 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 SEC22CQ9BRL7 303 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 RLN2P04090 185 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 URODP06132 367 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 PFKLP17858 780 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 BAG6P46379 1132 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms