RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 IL20RAQ9UHF4 553 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 DNAJC15Q9Y5T4 150 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 RBBP9O75884 186 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 FNTBP49356 437 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 ERVPABLB-1P60509 514 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 DSC1Q08554 894 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 GRIN2CQ14957 1233 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 RPS26P11Q5JNZ5 115 aaPredicted RBP12.58□□□□□ -0.4
SCN8A-202ENST00000355133 TCEAL3Q969E4 200 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 ISOC1Q96CN7 298 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 ECHDC3Q96DC8 303 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 RDH12Q96NR8 316 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 CNN2Q99439 309 aaKnown RBP12.58□□□□□ -0.4
SCN8A-202ENST00000355133 KCMF1Q9P0J7 381 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 SPO11Q9Y5K1 396 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 AK1P00568 194 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 HRGP04196 525 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 PROS1P07225 676 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 HTR6P50406 440 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 ALG10BQ5I7T1 473 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 C6orf141Q5SZD1 244 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 MANEALQ5VSG8 457 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 FBXO46Q6PJ61 603 aaPredicted RBP12.58□□□□□ -0.4
SCN8A-202ENST00000355133 COMMD6Q7Z4G1 85 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 TMEM151BQ8IW70 566 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 STOML3Q8TAV4 291 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 CPEB1Q9BZB8 566 aaKnown RBP12.58□□□□□ -0.4
SCN8A-202ENST00000355133 LMAN1LQ9HAT1 526 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 C14orf119Q9NWQ9 140 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 PCTPQ9UKL6 214 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 C10orf71Q711Q0 1435 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 CEBPBP17676 345 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 TRAM1Q15629 374 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 DEFB133Q30KQ1 61 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 STEAP4Q687X5 459 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 TIGD4Q8IY51 512 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 CCDC86Q9H6F5 360 aaKnown RBP12.58□□□□□ -0.4
SCN8A-202ENST00000355133 ABCG2Q9UNQ0 655 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 TMEM14AQ9Y6G1 99 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 NPIPB15A6NHN6 443 aaPredicted RBP12.57□□□□□ -0.4
SCN8A-202ENST00000355133 CNMDO75829 334 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 AMY2BP19961 511 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 TNFRSF1BP20333 461 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 HNRNPA2B1P22626 353 aaKnown RBP12.57□□□□□ -0.4
SCN8A-202ENST00000355133 FAM189BP81408 668 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 GSTM4Q03013 218 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 EEF1A1P5Q5VTE0 462 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 ARHGAP11AQ6P4F7 1023 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 SYNPOQ8N3V7 929 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 TMEM151AQ8N4L1 468 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 CD300LFQ8TDQ1 290 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 ADAMTS6Q9UKP5 1117 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 KCNIP3Q9Y2W7 256 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 SMCO3A2RU48 225 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 ZNF850A8MQ14 1090 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 INMT-MINDY4F8WBC2 141 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 M0QZQ0 153 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 MT-ND2P03891 347 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 CERS1P27544 350 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 NPRL3Q12980 569 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 C17orf99Q6UX52 265 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 HHIPQ96QV1 700 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 TUBA1CQ9BQE3 449 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 CWH43Q9H720 699 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 KLHL21Q9UJP4 597 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 IGKV6D-21A0A0A0MT36 114 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 NPC1O15118 1278 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 CD68P34810 354 aaPredicted RBP12.57□□□□□ -0.4
SCN8A-202ENST00000355133 RPA4Q13156 261 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 CEACAM7Q14002 265 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 EIF2S3LQ2VIR3 472 aaKnown RBP12.57□□□□□ -0.4
SCN8A-202ENST00000355133 ZNF440Q8IYI8 595 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 OR8J1Q8NGP2 316 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 LPAR4Q99677 370 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 ZFYVE21Q9BQ24 234 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 URM1Q9BTM9 101 aaKnown RBP12.57□□□□□ -0.4
SCN8A-202ENST00000355133 STARD5Q9NSY2 213 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 GGT3PA6NGU5 568 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 POU4F2Q12837 409 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 APOFQ13790 326 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 LDLRAD1Q5T700 205 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 MRPL10Q7Z7H8 261 aaKnown RBP12.57□□□□□ -0.4
SCN8A-202ENST00000355133 LIX1LQ8IVB5 337 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 SPRYD4Q8WW59 207 aaPredicted RBP12.57□□□□□ -0.4
SCN8A-202ENST00000355133 DDIT4LQ96D03 193 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 NECAB3Q96P71 396 aaPredicted RBP12.57□□□□□ -0.4
SCN8A-202ENST00000355133 ZNF442Q9H7R0 627 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 MRPL15Q9P015 296 aaKnown RBP12.57□□□□□ -0.4
SCN8A-202ENST00000355133 HSPB11Q9Y547 144 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 SLC22A31A6NKX4 558 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 OR52A4PA6NMU1 304 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 HPRP00739 348 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 AIMP2Q13155 320 aaKnown RBP12.57□□□□□ -0.4
SCN8A-202ENST00000355133 TCTE1Q5JU00 501 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 FCRLBQ6BAA4 426 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 SHFQ7M4L6 423 aa12.57□□□□□ -0.4
SCN8A-202ENST00000355133 PIAS4Q8N2W9 510 aaPredicted RBP12.57□□□□□ -0.4
SCN8A-202ENST00000355133 HOXB13Q92826 284 aaPredicted RBP12.57□□□□□ -0.4
SCN8A-202ENST00000355133 PRR11Q96HE9 360 aaPredicted RBP12.57□□□□□ -0.4
SCN8A-202ENST00000355133 FAM210AQ96ND0 272 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms