RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PSORS1C1Q9UIG5 152 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 ELF5Q9UKW6 265 aaPredicted RBP8.89□□□□□ -0.99
SMG6-202ENST00000354901 PRELID3BQ9Y3B1 194 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 MAP4K5Q9Y4K4 846 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 UNC80Q8N2C7 3258 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 AGAP14A8MT82 685 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 TGM5O43548 720 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 LEFTY1O75610 366 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 NCR1O76036 304 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 SIX6O95475 246 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 HOXB9P17482 250 aaPredicted RBP8.89□□□□□ -0.99
SMG6-202ENST00000354901 ERVK-25P63136 954 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 GANABQ14697 944 aaKnown RBP8.89□□□□□ -0.99
SMG6-202ENST00000354901 TMIGD1Q6UXZ0 262 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 RTL4Q6ZR62 310 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 ZFP41Q8N8Y5 198 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 HUS1BQ8NHY5 278 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 TCEAL4Q96EI5 215 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 C1GALT1C1Q96EU7 318 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 KLHL15Q96M94 604 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 OR51B5Q9H339 312 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 RHCGQ9UBD6 479 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 TNFRSF10DQ9UBN6 386 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 CLCA2Q9UQC9 943 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 J3KTA2 159 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 BET1O15155 118 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 AKAP8O43823 692 aaKnown RBP8.89□□□□□ -0.99
SMG6-202ENST00000354901 GPX2P18283 190 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 DNASE1P24855 282 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 PSMA1P25786 263 aaKnown RBP8.89□□□□□ -0.99
SMG6-202ENST00000354901 FEN1P39748 380 aaKnown RBP8.89□□□□□ -0.99
SMG6-202ENST00000354901 HSD17B12Q53GQ0 312 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 TMEM88Q6PEY1 159 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 GDPD4Q6W3E5 623 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 CBLL1Q75N03 491 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 SLC16A13Q7RTY0 426 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 SLC39A11Q8N1S5 342 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 FTMTQ8N4E7 242 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 DNAJB8Q8NHS0 232 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 CLP1Q92989 425 aaKnown RBP8.89□□□□□ -0.99
SMG6-202ENST00000354901 CIDECQ96AQ7 238 aaPredicted RBP8.89□□□□□ -0.99
SMG6-202ENST00000354901 VOPP1Q96AW1 172 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 TCF25Q9BQ70 676 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 NXF2Q9GZY0 626 aaKnown RBP8.89□□□□□ -0.99
SMG6-202ENST00000354901 C11orf16Q9NQ32 467 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 ASAH2Q9NR71 780 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 STOX2Q9P2F5 926 aaPredicted RBP8.89□□□□□ -0.99
SMG6-202ENST00000354901 RUVBL1Q9Y265 456 aaKnown RBP8.89□□□□□ -0.99
SMG6-202ENST00000354901 MAB21L2Q9Y586 359 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 PCDHB11Q9Y5F2 797 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 PCDHGA6Q9Y5G7 932 aa8.89□□□□□ -0.99
SMG6-202ENST00000354901 CDH23Q9H251 3354 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 GFYI3L273 518 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 TNFRSF11BO00300 401 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 YKT6O15498 198 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 NDUFA2O43678 99 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 GATBO75879 557 aaKnown RBP8.88□□□□□ -0.99
SMG6-202ENST00000354901 MPC2O95563 127 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 C6orf47O95873 294 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 C8AP07357 584 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 HLA-DMAP28067 261 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 VIPR1P32241 457 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 AVPR1BP47901 424 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 CLCNKAP51800 687 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 CRYBA2P53672 197 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 SPIBQ01892 262 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.88□□□□□ -0.99
SMG6-202ENST00000354901 ZNF385BQ569K4 471 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 CNIH2Q6PI25 160 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 TCEAL8Q8IYN2 117 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 MS4A15Q8N5U1 240 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 SLC5A8Q8N695 610 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 OR7G3Q8NG95 312 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 OR52E4Q8NGH9 312 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 NEIL2Q969S2 332 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 POLR2J2Q9GZM3 115 aaKnown RBP8.88□□□□□ -0.99
SMG6-202ENST00000354901 RNF208Q9H0X6 261 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 NUDT15Q9NV35 164 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 ACTR10Q9NZ32 417 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 SPG21Q9NZD8 308 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 DNAJC27Q9NZQ0 273 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 NDRG4Q9ULP0 352 aaKnown RBP8.88□□□□□ -0.99
SMG6-202ENST00000354901 SSR3Q9UNL2 185 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 MAPRE3Q9UPY8 281 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 ERVK-19Q9WJR5 959 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 A3GALT2U3KPV4 340 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 CKAP5Q14008 2032 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 hCG_1807616A0A1W2PRN6 198 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 FAM74A7A6NL05 159 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 F8W036 122 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 CXCL3P19876 107 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 SDC2P34741 201 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 CCR2P41597 374 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 CXCR4P61073 352 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 TLE2Q04725 743 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 KEAP1Q14145 624 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 DOC2BQ14184 412 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 RGNQ15493 299 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 SSX1Q16384 188 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 GGTA1PQ4G0N0 100 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms