RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 SLC9A6Q92581 669 aa18.46■□□□□ 0.55
COL13A1-201ENST00000354547 MENTQ9BUN1 341 aa18.46■□□□□ 0.55
COL13A1-201ENST00000354547 WASH6PQ9NQA3 447 aa18.46■□□□□ 0.55
COL13A1-201ENST00000354547 FBXL12Q9NXK8 326 aa18.46■□□□□ 0.55
COL13A1-201ENST00000354547 CNIH4Q9P003 139 aa18.46■□□□□ 0.55
COL13A1-201ENST00000354547 CRNNQ9UBG3 495 aaPredicted RBP18.46■□□□□ 0.55
COL13A1-201ENST00000354547 C4orf51C9J302 202 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 TP53P04637 393 aaPredicted RBP18.45■□□□□ 0.54
COL13A1-201ENST00000354547 HOXD12P35452 270 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 GIPRP48546 466 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 ALDH6A1Q02252 535 aaKnown RBP18.45■□□□□ 0.54
COL13A1-201ENST00000354547 C1DQ13901 141 aaKnown RBP18.45■□□□□ 0.54
COL13A1-201ENST00000354547 MLF2Q15773 248 aaPredicted RBP18.45■□□□□ 0.54
COL13A1-201ENST00000354547 C1orf53Q5VUE5 145 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 RSBN1Q5VWQ0 802 aaPredicted RBP18.45■□□□□ 0.54
COL13A1-201ENST00000354547 C18orf63Q68DL7 685 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 DGLUCYQ7Z3D6 616 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 PIAS4Q8N2W9 510 aaPredicted RBP18.45■□□□□ 0.54
COL13A1-201ENST00000354547 IL23AQ9NPF7 189 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 SERGEFQ9UGK8 458 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 IL20RAQ9UHF4 553 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 SSR3Q9UNL2 185 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 SLC9A8Q9Y2E8 581 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 ATG4BQ9Y4P1 393 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 C1QTNF3-AMACRE9PGA6 284 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 SNRNP200O75643 2136 aaKnown RBP18.45■□□□□ 0.54
COL13A1-201ENST00000354547 OXSR1O95747 527 aaPredicted RBP18.45■□□□□ 0.54
COL13A1-201ENST00000354547 EPPINO95925 133 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 CASP3P42574 277 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 RUNX1T1Q06455 604 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 NCF4Q15080 339 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 GAB4Q2WGN9 574 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 SYT14P1Q58G82 188 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 TMPRSS11AQ6ZMR5 421 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 NANOGP1Q8N7R0 232 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 GATAD2BQ8WXI9 593 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 TXNDC15Q96J42 360 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 A0A0C4DFX4 3053 aa18.45■□□□□ 0.54
COL13A1-201ENST00000354547 LRIT2A6NDA9 550 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 CCNKO75909 580 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 NFATC1O95644 943 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 PIPP12273 146 aaPredicted RBP18.44■□□□□ 0.54
COL13A1-201ENST00000354547 RORCP51449 518 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 RPA4Q13156 261 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 PHC2Q8IXK0 858 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 TMEM145Q8NBT3 493 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 OR52I1Q8NGK6 324 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 C11orf49Q9H6J7 331 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 FZD3Q9NPG1 666 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 KNL1Q8NG31 2342 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 CPSF4LA6NMK7 179 aaKnown RBP18.44■□□□□ 0.54
COL13A1-201ENST00000354547 NTSP30990 170 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 BCL6P41182 706 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 SOX9P48436 509 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 CAV3P56539 151 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 DBPQ10586 325 aaPredicted RBP18.44■□□□□ 0.54
COL13A1-201ENST00000354547 SF3B4Q15427 424 aaKnown RBP eCLIP18.44■□□□□ 0.54
COL13A1-201ENST00000354547 BAK1Q16611 211 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 ARMC4Q5T2S8 1044 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 PIP5KL1Q5T9C9 394 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 NXNL2Q5VZ03 156 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 CAMKK1Q8N5S9 505 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 DOK4Q8TEW6 326 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 PIK3R3Q92569 461 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 C1GALT1C1Q96EU7 318 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 CRISPLD2Q9H0B8 497 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 RACGAP1Q9H0H5 632 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 MAN2C1Q9NTJ4 1040 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 HCN2Q9UL51 889 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 STUB1Q9UNE7 303 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 NTNG1Q9Y2I2 539 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 SCN2AQ99250 2005 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 H3BQ06 376 aaPredicted RBP18.44■□□□□ 0.54
COL13A1-201ENST00000354547 SLITRK5O94991 958 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 FHP07954 510 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 COPZ1P61923 177 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 SLC9A5Q14940 896 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 GATAD2AQ86YP4 633 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 GANCQ8TET4 914 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 RASSF5Q8WWW0 418 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 ASB15Q8WXK1 588 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 TBC1D24Q9ULP9 559 aa18.44■□□□□ 0.54
COL13A1-201ENST00000354547 SNX4O95219 450 aa18.43■□□□□ 0.54
COL13A1-201ENST00000354547 HNRNPA1P09651 372 aaKnown RBP eCLIP18.43■□□□□ 0.54
COL13A1-201ENST00000354547 SMIM11AP58511 58 aa18.43■□□□□ 0.54
COL13A1-201ENST00000354547 HNRNPA0Q13151 305 aaKnown RBP18.43■□□□□ 0.54
COL13A1-201ENST00000354547 ARHGAP19Q14CB8 494 aa18.43■□□□□ 0.54
COL13A1-201ENST00000354547 MEDAGQ5VYS4 303 aa18.43■□□□□ 0.54
COL13A1-201ENST00000354547 TYW3Q6IPR3 259 aaKnown RBP18.43■□□□□ 0.54
COL13A1-201ENST00000354547 SYT14Q8NB59 555 aa18.43■□□□□ 0.54
COL13A1-201ENST00000354547 OR2A1Q8NGT9 310 aa18.43■□□□□ 0.54
COL13A1-201ENST00000354547 KAT2AQ92830 837 aa18.43■□□□□ 0.54
COL13A1-201ENST00000354547 OTULINQ96BN8 352 aa18.43■□□□□ 0.54
COL13A1-201ENST00000354547 ZNF582Q96NG8 517 aaPredicted RBP18.43■□□□□ 0.54
COL13A1-201ENST00000354547 TM9SF2Q99805 663 aa18.43■□□□□ 0.54
COL13A1-201ENST00000354547 WDR26Q9H7D7 661 aa18.43■□□□□ 0.54
COL13A1-201ENST00000354547 SEC14L4Q9UDX3 406 aa18.43■□□□□ 0.54
COL13A1-201ENST00000354547 PCDHGA4Q9Y5G9 962 aa18.43■□□□□ 0.54
COL13A1-201ENST00000354547 A0A1W2PR48 441 aa18.43■□□□□ 0.54
COL13A1-201ENST00000354547 TSPAN19P0C672 248 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms