RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PSMF1Q92530 271 aa11□□□□□ -0.65
SNCA-202ENST00000345009 TESCQ96BS2 214 aa11□□□□□ -0.65
SNCA-202ENST00000345009 CTHRC1Q96CG8 243 aa11□□□□□ -0.65
SNCA-202ENST00000345009 CHMP6Q96FZ7 201 aa11□□□□□ -0.65
SNCA-202ENST00000345009 OR52B2Q96RD2 323 aa11□□□□□ -0.65
SNCA-202ENST00000345009 UTP23Q9BRU9 249 aaKnown RBP11□□□□□ -0.65
SNCA-202ENST00000345009 DUSP26Q9BV47 211 aa11□□□□□ -0.65
SNCA-202ENST00000345009 RNF32Q9H0A6 362 aa11□□□□□ -0.65
SNCA-202ENST00000345009 NSRP1Q9H0G5 558 aaKnown RBP11□□□□□ -0.65
SNCA-202ENST00000345009 GLIPR2Q9H4G4 154 aa11□□□□□ -0.65
SNCA-202ENST00000345009 CDCP1Q9H5V8 836 aa11□□□□□ -0.65
SNCA-202ENST00000345009 ZNF71Q9NQZ8 489 aaPredicted RBP11□□□□□ -0.65
SNCA-202ENST00000345009 SDR39U1Q9NRG7 319 aaPredicted RBP11□□□□□ -0.65
SNCA-202ENST00000345009 DDX18Q9NVP1 670 aaKnown RBP11□□□□□ -0.65
SNCA-202ENST00000345009 TMEM45AQ9NWC5 275 aa11□□□□□ -0.65
SNCA-202ENST00000345009 TAS2R9Q9NYW1 312 aa11□□□□□ -0.65
SNCA-202ENST00000345009 MAT2BQ9NZL9 334 aa11□□□□□ -0.65
SNCA-202ENST00000345009 ZIM2Q9NZV7 527 aa11□□□□□ -0.65
SNCA-202ENST00000345009 MYOTQ9UBF9 498 aa11□□□□□ -0.65
SNCA-202ENST00000345009 GPR45Q9Y5Y3 372 aa11□□□□□ -0.65
SNCA-202ENST00000345009 RP1L1Q8IWN7 2480 aaPredicted RBP11□□□□□ -0.65
SNCA-202ENST00000345009 KALRNO60229 2985 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 A0A1W2PS29 197 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 CAPN14A8MX76 684 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 E9PBE3 544 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 PLOD2O00469 737 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 CFLARO15519 480 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 SOX30O94993 753 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 IL6P05231 212 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 ALDOCP09972 364 aaKnown RBP10.99□□□□□ -0.65
SNCA-202ENST00000345009 LAMP1P11279 417 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 NCF2P19878 526 aaPredicted RBP10.99□□□□□ -0.65
SNCA-202ENST00000345009 SOX11P35716 441 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 SSR4P51571 173 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 ARFIP2P53365 341 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 SLC37A1P57057 533 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 MLF1P58340 268 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 DCAF7P61962 342 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 PRR5P85299 388 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 LY6DQ14210 128 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 MPEG1Q2M385 716 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 ZNF628Q5EBL2 1059 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 DGAT2L6Q6ZPD8 337 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 CAMKMTQ7Z624 323 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 CPLX4Q7Z7G2 160 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 TAGAPQ8N103 731 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 ARMC10Q8N2F6 343 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 SLC15A4Q8N697 577 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 EXD3Q8N9H8 876 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 OR8J2Q8NGG1 315 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 SLC22A8Q8TCC7 542 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 THAP3Q8WTV1 239 aaPredicted RBP10.99□□□□□ -0.65
SNCA-202ENST00000345009 OR5P2Q8WZ92 322 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 HAS2Q92819 552 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 KAT2AQ92830 837 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 TP53INP1Q96A56 240 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 CIDECQ96AQ7 238 aaPredicted RBP10.99□□□□□ -0.65
SNCA-202ENST00000345009 ELP4Q96EB1 424 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 GAL3ST4Q96RP7 486 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 EBF4Q9BQW3 602 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.99□□□□□ -0.65
SNCA-202ENST00000345009 NEUROD4Q9HD90 331 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 TP53TG5Q9Y2B4 290 aa10.99□□□□□ -0.65
SNCA-202ENST00000345009 PRSS51A0A1B0GVH4 220 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 TTC36A6NLP5 189 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 HRKO00198 91 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 RNASET2O00584 256 aaKnown RBP10.98□□□□□ -0.65
SNCA-202ENST00000345009 ITGA10O75578 1167 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 SSTR4P31391 388 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 FRKP42685 505 aaPredicted RBP10.98□□□□□ -0.65
SNCA-202ENST00000345009 CYB561P49447 251 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 SMCPP49901 116 aaPredicted RBP10.98□□□□□ -0.65
SNCA-202ENST00000345009 NME5P56597 212 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 UFM1P61960 85 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 MRPS35P82673 323 aaKnown RBP10.98□□□□□ -0.65
SNCA-202ENST00000345009 OC90Q02509 493 aaPredicted RBP10.98□□□□□ -0.65
SNCA-202ENST00000345009 MGAT2Q10469 447 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 KLRB1Q12918 225 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 HSPB3Q12988 150 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 TLR1Q15399 786 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 ZNHIT3Q15649 155 aaPredicted RBP10.98□□□□□ -0.65
SNCA-202ENST00000345009 LTB4RQ15722 352 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 FAM174BQ3ZCQ3 159 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 SPDYE7PQ495Y7 208 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 TRMT12Q53H54 448 aaKnown RBP10.98□□□□□ -0.65
SNCA-202ENST00000345009 TMEM198Q66K66 360 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 B3GNTL1Q67FW5 361 aaPredicted RBP10.98□□□□□ -0.65
SNCA-202ENST00000345009 FCRLBQ6BAA4 426 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 FAM111BQ6SJ93 734 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 OPN5Q6U736 354 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 IGFL2Q6UWQ7 119 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 ZNF551Q7Z340 670 aaPredicted RBP10.98□□□□□ -0.65
SNCA-202ENST00000345009 GPALPP1Q8IXQ4 340 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 DND1Q8IYX4 353 aaKnown RBP10.98□□□□□ -0.65
SNCA-202ENST00000345009 ZNF615Q8N8J6 731 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 C17orf47Q8NEP4 570 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 OR52R1Q8NGF1 315 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 C16orf52Q8NHV5 167 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 DOK4Q8TEW6 326 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 ASB15Q8WXK1 588 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms