RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 FUT4P22083 530 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 LIMS1P48059 325 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 IL18R1Q13478 541 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 MICAQ29983 383 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 MFSD12Q6NUT3 480 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 HMGN2P46Q86SG4 172 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 SLC25A45Q8N413 288 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 OR4D11Q8NGI4 311 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 VANGL1Q8TAA9 524 aaPredicted RBP18.74■□□□□ 0.59
RTN1-202ENST00000342503 DOK4Q8TEW6 326 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 SLC35A4Q96G79 324 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 SPATA5L1Q9BVQ7 753 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 RAB33BQ9H082 229 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 ERVMER34-1Q9H9K5 563 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 SOHLH2Q9NX45 425 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 TUBA8Q9NY65 449 aaPredicted RBP18.74■□□□□ 0.59
RTN1-202ENST00000342503 PTGFRNQ9P2B2 879 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 RHCGQ9UBD6 479 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 TNRC6BQ9UPQ9 1833 aaKnown RBP18.74■□□□□ 0.59
RTN1-202ENST00000342503 GADD45GO95257 159 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 BMP10O95393 424 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 ETS2P15036 469 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 CTSKP43235 329 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 OR1D5P58170 312 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 CD47Q08722 323 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 MEP1AQ16819 746 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 CTU2Q2VPK5 515 aaKnown RBP18.74■□□□□ 0.59
RTN1-202ENST00000342503 FHL5Q5TD97 284 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 PRAMEF8Q5VWM4 474 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 PRAMEF7Q5VXH5 474 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 CDC73Q6P1J9 531 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 COMTD1Q86VU5 262 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 SLC5A8Q8N695 610 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 TTC29Q8NA56 475 aaPredicted RBP18.74■□□□□ 0.59
RTN1-202ENST00000342503 ADAMTS15Q8TE58 950 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 ANKRD9Q96BM1 317 aaPredicted RBP18.74■□□□□ 0.59
RTN1-202ENST00000342503 ZNF285Q96NJ3 590 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 FEVQ99581 238 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 WFDC6Q9BQY6 131 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 BTBD2Q9BX70 525 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 EPB41L1Q9H4G0 881 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 GIN1Q9NXP7 522 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 KLHL3Q9UH77 587 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 PLCL2Q9UPR0 1127 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 SMIM31A0A1B0GVY4 71 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 TRIM64CA6NLI5 447 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 FFAR1O14842 300 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 PCDH17O14917 1159 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 FOXS1O43638 330 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 OR6B1O95007 311 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 ATP1B1P05026 303 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 IL7RP16871 459 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 NT5EP21589 574 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 HOXA6P31267 233 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 DHPSP49366 369 aaPredicted RBP18.73■□□□□ 0.59
RTN1-202ENST00000342503 HMGA2P52926 109 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 ISL1P61371 349 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 ZXDAP98168 799 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 BNC1Q01954 994 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 RAPSNQ13702 412 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 NDUFA9Q16795 377 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 TRMT12Q53H54 448 aaKnown RBP18.73■□□□□ 0.59
RTN1-202ENST00000342503 PRPF38BQ5VTL8 546 aaKnown RBP18.73■□□□□ 0.59
RTN1-202ENST00000342503 RBM45Q8IUH3 476 aaKnown RBP18.73■□□□□ 0.59
RTN1-202ENST00000342503 LACC1Q8IV20 430 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 CHDHQ8NE62 594 aaPredicted RBP18.73■□□□□ 0.59
RTN1-202ENST00000342503 ZDHHC12Q96GR4 267 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 PDE7BQ9NP56 450 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 RLIMQ9NVW2 624 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 NDUFA13Q9P0J0 144 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 EPHA6Q9UF33 1036 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 KCND3Q9UK17 655 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 LIPT1Q9Y234 373 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 CSNK1G3Q9Y6M4 447 aa18.73■□□□□ 0.59
RTN1-202ENST00000342503 CCDC163A0A0D9SF12 145 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 RYKP34925 604 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 CHRNEQ04844 493 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 SRSF5Q13243 272 aaKnown RBP18.72■□□□□ 0.59
RTN1-202ENST00000342503 KEAP1Q14145 624 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 SHBQ15464 509 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 FAM214AQ32MH5 1076 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 ATAD3BQ5T9A4 648 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 LYSMD4Q5XG99 296 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 TCTN3Q6NUS6 607 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 DEF8Q6ZN54 512 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 C16orf62Q7Z3J2 963 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 SLC35F3Q8IY50 421 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 SLC16A11Q8NCK7 471 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 HDAC2Q92769 488 aaKnown RBP18.72■□□□□ 0.59
RTN1-202ENST00000342503 CDS1Q92903 461 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 AHCYL2Q96HN2 611 aaKnown RBP18.72■□□□□ 0.59
RTN1-202ENST00000342503 TRNT1Q96Q11 434 aaKnown RBP18.72■□□□□ 0.59
RTN1-202ENST00000342503 SLC38A1Q9H2H9 487 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 IRAK4Q9NWZ3 460 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 HCN3Q9P1Z3 774 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 C19orf53Q9UNZ5 99 aaPredicted RBP18.72■□□□□ 0.59
RTN1-202ENST00000342503 CACNA1IQ9P0X4 2223 aa18.72■□□□□ 0.59
RTN1-202ENST00000342503 HYKKA2RU49 373 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 DUXAA6NLW8 204 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 M0R3H8 397 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms