RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 FAM57AQ8TBR7 257 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 ZNF675Q8TD23 568 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 ITLN2Q8WWU7 325 aaPredicted RBP12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 SREK1Q8WXA9 508 aaKnown RBP12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 CTHRC1Q96CG8 243 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 ZNF681Q96N22 645 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 KCNA7Q96RP8 456 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 BRINP2Q9C0B6 783 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 MAT2BQ9NZL9 334 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 PRODH2Q9UF12 536 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 SH3BGRL2Q9UJC5 107 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 ENTPD4Q9Y227 616 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 DLGAP4Q9Y2H0 992 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 TIMM22Q9Y584 194 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 CHCHD2Q9Y6H1 151 aaPredicted RBP12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 A0A1B0GTH9 108 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 A0A1W2PS29 197 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 FOXO6A8MYZ6 492 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 NPIPB8E9PQR5 432 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 CDC40O60508 579 aaKnown RBP eCLIP12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 TRIM13O60858 407 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 SLITRK5O94991 958 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 CHEK2O96017 543 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 IGHG3P01860 377 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 IL3P08700 152 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 ANXA4P09525 319 aaPredicted RBP12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 CT62P0C5K7 136 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 CHN1P15882 459 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 S1PR1P21453 382 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 GPX3P22352 226 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 PRPH2P23942 346 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 FEN1P39748 380 aaKnown RBP12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 NR0B1P51843 470 aaKnown RBP12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 KCNJ2P63252 427 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 RAE1P78406 368 aaKnown RBP12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 HSF1Q00613 529 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 MGAT2Q10469 447 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 FOXO1Q12778 655 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 CEBPEQ15744 281 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 SPDYAQ5MJ70 313 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 IKBIPQ70UQ0 350 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 DOLPP1Q86YN1 238 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 BANPQ8N9N5 519 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 OR10G3Q8NGC4 313 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 OR52N2Q8NGI0 321 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 C16orf78Q8WTQ4 265 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 ADIPOR1Q96A54 375 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 CNRIP1Q96F85 164 aaPredicted RBP12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 APIPQ96GX9 242 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 SMC6Q96SB8 1091 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 TMEM109Q9BVC6 243 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 TP63Q9H3D4 680 aaPredicted RBP12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 ZFP64Q9NPA5 681 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 QPCTLQ9NXS2 382 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 SENP1Q9P0U3 644 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 B4GALT7Q9UBV7 327 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 ZNF639Q9UID6 485 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 NPFFR2Q9Y5X5 522 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 CROCCQ5TZA2 2017 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 NAV2Q8IVL1 2488 aa12.28□□□□□ -0.44
SIRPB3P-201ENST00000340424 A0A0G2JMM0 328 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 A0A1B0GVC2 190 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 A0A1W2PPB8 328 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 A0A1W2PRS3 328 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 PINLYPA6NC86 204 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 FAM166BA8MTA8 275 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 KIR3DP1A8MWS1 328 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 SLC28A1O00337 649 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 BCKDKO14874 412 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 SUSD5O60279 629 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 HCN1O60741 890 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 SNX4O95219 450 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 TPOP07202 933 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 NEFHP12036 1026 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 DDCP20711 480 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 MPIP34949 423 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 SERPINB5P36952 375 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 DNASE1L1P49184 302 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 FOXA1P55317 472 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 PCLAFQ15004 111 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 CRYBG3Q68DQ2 2970 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 TMEM211Q6ICI0 200 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 FGD2Q7Z6J4 655 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 CD163Q86VB7 1156 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 C10orf107Q8IVU9 208 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 SRRM1Q8IYB3 904 aaKnown RBP12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 TMEM251Q8N6I4 163 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 OR2W6PQ8NHA6 318 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 HSPBAP1Q96EW2 488 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 DOHHQ9BU89 302 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 STMN4Q9H169 189 aaPredicted RBP12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 RUBCNLQ9H714 662 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 EML4Q9HC35 981 aaKnown RBP12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 MYNNQ9NPC7 610 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 CHST11Q9NPF2 352 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 PFDN4Q9NQP4 134 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 SLC35C2Q9NQQ7 365 aa12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 TUBA8Q9NY65 449 aaPredicted RBP12.27□□□□□ -0.45
SIRPB3P-201ENST00000340424 TAS2R7Q9NYW3 318 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms