RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 SLC4A5Q9BY07 1137 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PKIBQ9C010 78 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MTG2Q9H4K7 406 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 APMAPQ9HDC9 416 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ATP13A2Q9NQ11 1180 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PPP4R1LQ9P1A2 415 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PPM1HQ9ULR3 514 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 NUP205Q92621 2012 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SCDO00767 359 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PLOD3O60568 738 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MED6O75586 246 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SEC24DO94855 1032 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 NDST3O95803 873 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CSF1P09603 554 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SLURP2P0DP57 97 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CDH1P12830 882 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 S1PR1P21453 382 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 IGFBP5P24593 272 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MAGEA12P43365 314 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 LIMK2P53671 638 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PRPS1P60891 318 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 WDR5P61964 334 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PMPCAQ10713 525 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SNTB1Q13884 538 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 HNF4GQ14541 408 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 UPP1Q16831 310 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 HAGHLQ6PII5 290 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 NXPE4Q6UWF7 544 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 XKR5Q6UX68 686 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 Q7L0L9 218 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ERASQ7Z444 233 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TRABD2AQ86V40 505 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 BPHLQ86WA6 291 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 LSRQ86X29 649 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 OR5K1Q8NHB7 308 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TMEM40Q8WWA1 233 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PPCDCQ96CD2 204 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CD180Q99467 661 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PIGQQ9BRB3 760 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 OR2AG1Q9H205 316 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 KCNF1Q9H3M0 494 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF224Q9NZL3 707 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SLC5A6Q9Y289 635 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MAP4K5Q9Y4K4 846 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 FKBP7Q9Y680 259 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 C2orf78A6NCI8 922 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 FABP12A6NFH5 140 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SH2D7A6NKC9 451 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 C9IYK1 514 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 OIP5O43482 229 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 OR2T1O43869 369 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MTX2O75431 263 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 RFPL3O75679 317 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SLC22A5O76082 557 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 RGS11O94810 467 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 HLA-DQA2P01906 255 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 EDN1P05305 212 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MSX2P35548 267 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TAS2R41P59536 307 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TAS2R46P59540 309 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF844Q08AG5 666 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 NFATC2Q13469 925 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF239Q16600 458 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 C21orf62-AS1Q17RA5 79 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 GFOD2Q3B7J2 385 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SLC25A52Q3SY17 297 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 KHDC1LQ5JSQ8 128 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 KIAA1161Q6NSJ0 714 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 FAM111BQ6SJ93 734 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF367Q7RTV3 350 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 VN1R5Q7Z5H4 357 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 JAZF1Q86VZ6 243 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 THOC6Q86W42 341 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 NUDT13Q86X67 352 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CARFQ8N187 725 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TRAF4Q9BUZ4 470 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CRLF2Q9HC73 371 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ARMCX1Q9P291 453 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ADAM29Q9UKF5 820 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 LHX6Q9UPM6 363 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CNTN6Q9UQ52 1028 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 GXYLT2A0PJZ3 443 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 DCDC2BA2VCK2 349 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 GABRR3A8MPY1 467 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ACOX3O15254 700 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 USP12O75317 370 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ADH4P08319 380 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SRCP12931 536 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TPT1P13693 172 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 FNTBP49356 437 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 LRIT3Q3SXY7 679 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PYDC2Q56P42 97 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PRSS55Q6UWB4 352 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 C17orf53Q8N3J3 647 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 NDNFQ8TB73 568 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ADAMTS14Q8WXS8 1223 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SMPDL3BQ92485 455 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 DVL3Q92997 716 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms