RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 ASNA1O43681 348 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 BRINP1O60477 761 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 PDE5AO76074 875 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 HMGN2P05204 90 aaKnown RBP13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 TCN2P20062 427 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 HTR1EP28566 365 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 CRATP43155 626 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 OR4D2P58180 307 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 RPS15P62841 145 aaKnown RBP13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 FUT7Q11130 342 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 RTP5Q14D33 572 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 FXNQ16595 210 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 TRMT12Q53H54 448 aaKnown RBP13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 FAM111BQ6SJ93 734 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 HPS6Q86YV9 775 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 CLEC4FQ8N1N0 589 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 RNF148Q8N7C7 305 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 ENDOVQ8N8Q3 282 aaKnown RBP13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 NUP43Q8NFH3 380 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 PTPMT1Q8WUK0 201 aaPredicted RBP13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 ZNF583Q96ND8 569 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 ACTRT3Q9BYD9 372 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 ASCL3Q9NQ33 180 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 PNO1Q9NRX1 252 aaKnown RBP13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 PTRH2Q9Y3E5 179 aaKnown RBP13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 MYOCOSA0A1B0GUC4 107 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 TTC36A6NLP5 189 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 DUXAA6NLW8 204 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 ANKRD65E5RJM6 399 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 RAD1O60671 282 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 STAMBPO95630 424 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 AGR2O95994 175 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 PTGER1P34995 402 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 PRIM2P49643 509 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 EFNA3P52797 238 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 PRKAG1P54619 331 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 RBBP4Q09028 425 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 TRIM25Q14258 630 aaKnown RBP13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 ZNF267Q14586 743 aaPredicted RBP13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 MFSD12Q6NUT3 480 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 TMEM205Q6UW68 189 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 ANKRD37Q7Z713 158 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 IFNEQ86WN2 208 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 PTRH1Q86Y79 214 aaKnown RBP13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 C11orf65Q8NCR3 313 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 MORN4Q8NDC4 146 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 CT55Q8WUE5 264 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 NXPE2Q96DL1 559 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 MAGED4Q96JG8 741 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 CNPPD1Q9BV87 410 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 TMEM38AQ9H6F2 299 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 COPS7AQ9UBW8 275 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 BCAP29Q9UHQ4 241 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 TCFL5Q9UL49 500 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 CFL2Q9Y281 166 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 ZNF451Q9Y4E5 1061 aa13.56□□□□□ -0.24
NIPAL3-202ENST00000339255 LOC102723996A0A087X1L8 192 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 ELOVL7A1L3X0 281 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 TMEM247A6NEH6 219 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 TNFRSF21O75509 655 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 CBX7O95931 251 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 CT62P0C5K7 136 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 S1PR1P21453 382 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 SOX18P35713 384 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 PGDP52209 483 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 DSTNP60981 165 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 TRAP1Q12931 704 aaKnown RBP13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 CAMK2BQ13554 666 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 DNASE1L3Q13609 305 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 GNA13Q14344 377 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 PUM1Q14671 1186 aaKnown RBP eCLIP13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 SFT2D3Q587I9 215 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 COX20Q5RI15 118 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 GCNT6Q5T4J0 391 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 DGAT2L6Q6ZPD8 337 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 LANCL3Q6ZV70 420 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 SLC30A8Q8IWU4 369 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 LGI4Q8N135 537 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 CDRT4Q8N9R6 151 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 GIN1Q9NXP7 522 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 KCND3Q9UK17 655 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 ERVK-19Q9WJR5 959 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 PCDHGB3Q9Y5G1 929 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 PCDHGA6Q9Y5G7 932 aa13.55□□□□□ -0.24
NIPAL3-202ENST00000339255 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 A0A1W2PQ72 361 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 SAGE2PA6NJ88 616 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 GMNNO75496 209 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 IGKV3-11P04433 115 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 UMODP07911 640 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 ETFAP13804 333 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 TCN1P20061 433 aaPredicted RBP13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 MATN1P21941 496 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 MMP11P24347 488 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 GZMMP51124 257 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 CORO7P57737 925 aa13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 LASP1Q14847 261 aaKnown RBP13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 ZNHIT3Q15649 155 aaPredicted RBP13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 ZNF630Q2M218 657 aaPredicted RBP13.54□□□□□ -0.24
NIPAL3-202ENST00000339255 VMACQ2NL98 169 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms