RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 KMT5CQ86Y97 462 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 ZNF595Q8IYB9 648 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 SETD9Q8NE22 299 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 C7orf57Q8NEG2 295 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 OR7G2Q8NG99 324 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 GPR32P1Q8NGA4 272 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 ADAMTS15Q8TE58 950 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 NCSTNQ92542 709 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 NR4A3Q92570 626 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 KAT2AQ92830 837 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 PMM1Q92871 262 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 MUS81Q96NY9 551 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 PINK1Q9BXM7 581 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 NLGN3Q9NZ94 848 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 PILRBQ9UKJ0 227 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 CLCA2Q9UQC9 943 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 DSPPQ9NZW4 1301 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 A0A087WXM4 84 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 H0YIG0 161 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 LAMTOR5O43504 91 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 FGF17O60258 216 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 RECKO95980 971 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 MSL3P1P0C860 447 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 PABPC4LP0CB38 370 aaKnown RBP15.24■□□□□ 0.03
HPS1-202ENST00000338546 OR1E2P47887 323 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 AVPR1BP47901 424 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 LIMS1P48059 325 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 DHPSP49366 369 aaPredicted RBP15.24■□□□□ 0.03
HPS1-202ENST00000338546 SPIBQ01892 262 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 GRM7Q14831 915 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 LTB4RQ15722 352 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 MICAQ29983 383 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 DEFB110Q30KQ9 67 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 LIN52Q52LA3 116 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 MED25Q71SY5 747 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 SLC35F3Q8IY50 421 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 ZNF786Q8N393 782 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 ATG16L2Q8NAA4 619 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 OR5T3Q8NGG3 340 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 OR9A4Q8NGU2 314 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 ADAMTS16Q8TE57 1224 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 COL26A1Q96A83 441 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 C16orf58Q96GQ5 468 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 DHRS1Q96LJ7 313 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 GRIP2Q9C0E4 1043 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 KRT84Q9NSB2 600 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 STARD5Q9NSY2 213 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 ACER3Q9NUN7 267 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 SOHLH2Q9NX45 425 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 KIF17Q9P2E2 1029 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 ENOPH1Q9UHY7 261 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 SLC9A8Q9Y2E8 581 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 CACNA1IQ9P0X4 2223 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 MN1Q10571 1320 aaPredicted RBP15.23■□□□□ 0.03
HPS1-202ENST00000338546 IGHV5-51A0A0C4DH38 117 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 FOXS1O43638 330 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 KIF1CO43896 1103 aaKnown RBP15.23■□□□□ 0.03
HPS1-202ENST00000338546 CTNSO60931 367 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 RDH16O75452 317 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 TFAP2AP05549 437 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 CHRM4P08173 479 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 ALDH4A1P30038 563 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 HOXD12P35452 270 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 GFERP55789 205 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 HSD11B2P80365 405 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 IGLV3-21P80748 117 aaPredicted RBP15.23■□□□□ 0.03
HPS1-202ENST00000338546 BNC1Q01954 994 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 FUT5Q11128 374 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 BNIP3Q12983 259 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 TOP3AQ13472 1001 aaPredicted RBP15.23■□□□□ 0.03
HPS1-202ENST00000338546 SQSTM1Q13501 440 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 SHBQ15464 509 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 GPAT3Q53EU6 434 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 COLEC12Q5KU26 742 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 RBM48Q5RL73 367 aaKnown RBP15.23■□□□□ 0.03
HPS1-202ENST00000338546 ZNF691Q5VV52 312 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 WDR74Q6RFH5 385 aaPredicted RBP15.23■□□□□ 0.03
HPS1-202ENST00000338546 TSSK4Q6SA08 328 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 PRSS42Q7Z5A4 293 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 HDAC2Q92769 488 aaKnown RBP15.23■□□□□ 0.03
HPS1-202ENST00000338546 EDAQ92838 391 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 ANKRD9Q96BM1 317 aaPredicted RBP15.23■□□□□ 0.03
HPS1-202ENST00000338546 CTHRC1Q96CG8 243 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 MVB12AQ96EY5 273 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 STACQ99469 402 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 BARD1Q99728 777 aaKnown RBP15.23■□□□□ 0.03
HPS1-202ENST00000338546 ING2Q9H160 280 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 PIGUQ9H490 435 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 TMEM74BQ9NUR3 256 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 ACAD8Q9UKU7 415 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 TESMINQ9Y4I5 508 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 TRIOO75962 3097 aa15.23■□□□□ 0.03
HPS1-202ENST00000338546 CACNA1EQ15878 2313 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 E9PQ18 207 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 CLDN4O14493 209 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 TOX3O15405 576 aaPredicted RBP15.22■□□□□ 0.03
HPS1-202ENST00000338546 GADD45GO95257 159 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 CLIC3O95833 236 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 LGI1O95970 557 aa15.22■□□□□ 0.03
HPS1-202ENST00000338546 AK1P00568 194 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms