RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ARPC5O15511 151 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 NDUFS4O43181 175 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 C8orf89P0DMQ9 161 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 CELP19835 753 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 PDGFRLQ15198 375 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 PAN3Q58A45 887 aaKnown RBP15.32■□□□□ 0.04
NPHP3-201ENST00000337331 CPZQ66K79 652 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 RAB12Q6IQ22 244 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 TMEM17Q86X19 198 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 GPALPP1Q8IXQ4 340 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 NANPQ8TBE9 248 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 NELL2Q99435 816 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 GPER1Q99527 375 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 KCNK6Q9Y257 313 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 K7ERQ8 282 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 GLAP06280 429 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 H2AFB2P0C5Z0 115 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 CHMP24386 653 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 IGFALSP35858 605 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 ARCN1P48444 511 aaKnown RBP15.31■□□□□ 0.04
NPHP3-201ENST00000337331 CDH11P55287 796 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 AP3S2P59780 193 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 EIPR1Q53HC9 387 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 ALG1LQ6GMV1 187 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 TEX261Q6UWH6 196 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 NUDT8Q8WV74 236 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 ZNF583Q96ND8 569 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 DPH2Q9BQC3 489 aaPredicted RBP15.31■□□□□ 0.04
NPHP3-201ENST00000337331 TSSK6Q9BXA6 273 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 ZNF385DQ9H6B1 395 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 TCF7L1Q9HCS4 588 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 U3KQ87 197 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 hCG_1807616A0A1W2PRN6 198 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 GLOD5A6NK44 160 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 REM1O75628 298 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 SRCP12931 536 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 AHCYP23526 432 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 HMGCLP35914 325 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 FLI1Q01543 452 aaPredicted RBP15.31■□□□□ 0.04
NPHP3-201ENST00000337331 MC2RQ01718 297 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 CRYZQ08257 329 aaKnown RBP15.31■□□□□ 0.04
NPHP3-201ENST00000337331 SF3A2Q15428 464 aaKnown RBP15.31■□□□□ 0.04
NPHP3-201ENST00000337331 CORO6Q6QEF8 472 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 OR9A1PQ8NGU1 263 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 OR5J2Q8NH18 312 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 NEIL3Q8TAT5 605 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 FUBP1Q96AE4 644 aaKnown RBP15.31■□□□□ 0.04
NPHP3-201ENST00000337331 MN1Q10571 1320 aaPredicted RBP15.31■□□□□ 0.04
NPHP3-201ENST00000337331 TSPAN6O43657 245 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 HPGDSO60760 199 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 SPDEFO95238 335 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 GIMD1P0DJR0 217 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 HLA-EP13747 358 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 HLA-DMAP28067 261 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 RAB5BP61020 215 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 SLC35F1Q5T1Q4 408 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 TRNP1Q6NT89 227 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 PELOQ9BRX2 385 aaKnown RBP15.31■□□□□ 0.04
NPHP3-201ENST00000337331 SPNS1Q9H2V7 528 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 PLAGL1Q9UM63 463 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 ZNF98A6NK75 572 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 STC2O76061 302 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 RD3LP0DJH9 198 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 AKT2P31751 481 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 KIR2DL3P43628 341 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 PRPF38BQ5VTL8 546 aaKnown RBP15.31■□□□□ 0.04
NPHP3-201ENST00000337331 TMEM81Q6P7N7 255 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 ENPP7Q6UWV6 458 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 ATCAYQ86WG3 371 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 TMIEQ8NEW7 156 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 PROKR1Q8TCW9 393 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 TTC9Q92623 222 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 C1QTNF6Q9BXI9 259 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 REEP4Q9H6H4 257 aa15.31■□□□□ 0.04
NPHP3-201ENST00000337331 TCRBV5S2A0A599 114 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 ZNF840PA6NDX5 716 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 PCDH17O14917 1159 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 ADH5P11766 374 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 EPHA2P29317 976 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 PER3P56645 1201 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 SP140Q13342 867 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 PRSS36Q5K4E3 855 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 LINGO2Q7L985 606 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 C2CD4CQ8TF44 421 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 MAGIXQ9H6Y5 334 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 GORASP2Q9H8Y8 452 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 MRPL15Q9P015 296 aaKnown RBP15.3■□□□□ 0.04
NPHP3-201ENST00000337331 KLK4Q9Y5K2 254 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 KIAA0100Q14667 2235 aaKnown RBP15.3■□□□□ 0.04
NPHP3-201ENST00000337331 XIRP1Q702N8 1843 aaKnown RBP15.3■□□□□ 0.04
NPHP3-201ENST00000337331 ANXA2P2A6NMY6 339 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 ZNF879B4DU55 563 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 ANXA2P07355 339 aaKnown RBP15.3■□□□□ 0.04
NPHP3-201ENST00000337331 ALPPL2P10696 532 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 CD6P30203 668 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 ZNF169Q14929 603 aaPredicted RBP15.3■□□□□ 0.04
NPHP3-201ENST00000337331 PLEKHS1Q5SXH7 462 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 SFRP4Q6FHJ7 346 aaPredicted RBP15.3■□□□□ 0.04
NPHP3-201ENST00000337331 DNAJC22Q8N4W6 341 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 C12orf45Q8N5I9 185 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms