RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 TUBA1CQ9BQE3 449 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 CHIAQ9BZP6 476 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 KLHL31Q9H511 634 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 RDH14Q9HBH5 336 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 BRD7Q9NPI1 651 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 SOHLH2Q9NX45 425 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 PAQR5Q9NXK6 330 aaPredicted RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 NLKQ9UBE8 527 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 CRNNQ9UBG3 495 aaPredicted RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 P2RX2Q9UBL9 471 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 NUFIP1Q9UHK0 495 aaKnown RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 ZFR2Q9UPR6 939 aaKnown RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 PCDHGA3Q9Y5H0 932 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 SNTNA6NMZ2 147 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 ARHGAP33O14559 1287 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 SLC30A4O14863 429 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 PLD2O14939 933 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 LCMT2O60294 686 aaKnown RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 GPR37L1O60883 481 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 GUCY1B2O75343 617 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 TPPPO94811 219 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 ITPKBP27987 946 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 COX10Q12887 443 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 CTF1Q16619 201 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 ZNF630Q2M218 657 aaPredicted RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 DCUN1D3Q8IWE4 304 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 NRMQ8IXM6 262 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 IPCEF1Q8WWN9 437 aaPredicted RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 FGF13Q92913 245 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 MCHR1Q99705 422 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 MVB12BQ9H7P6 319 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 C3orf14Q9HBI5 128 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 SLC52A3Q9NQ40 469 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 MBNL1Q9NR56 388 aaKnown RBP7.8□□□□□ -1.16
HPS4-201ENST00000336873 TBCCD1Q9NVR7 557 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 RPS6KB2Q9UBS0 482 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 BTNL2Q9UIR0 455 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 ENPP4Q9Y6X5 453 aa7.8□□□□□ -1.16
HPS4-201ENST00000336873 TDRD15B5MCY1 1934 aaKnown RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 PRR23D1E9PI22 279 aaPredicted RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 PLPP1O14494 284 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 RAD1O60671 282 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 ZNF821O75541 412 aaPredicted RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 KAT7O95251 611 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 PRR23D2P0DMB1 279 aaPredicted RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 GPX2P18283 190 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 ITIH1P19827 911 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 CSRP3P50461 194 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 RORCP51449 518 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 PPP5CP53041 499 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 KCNJ10P78508 379 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 SRSF5Q13243 272 aaKnown RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 GPM6BQ13491 265 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 ELAVL3Q14576 367 aaKnown RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 PDGFRLQ15198 375 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 QPRTQ15274 297 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 SF3B4Q15427 424 aaKnown RBP eCLIP7.79□□□□□ -1.161e-9■■■■□ 23.3
HPS4-201ENST00000336873 SMAD2Q15796 467 aaKnown RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 KCNJ8Q15842 424 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 TBRG1Q3YBR2 411 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 KDM4DQ6B0I6 523 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 C8orf82Q6P1X6 216 aaPredicted RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 ZNF783Q6ZMS7 281 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 CBARPQ8N350 705 aaPredicted RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 OR6T1Q8NGN1 323 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 SLC7A13Q8TCU3 470 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 ZFPM2Q8WW38 1151 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 HERVK_113Q902F9 699 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 TESCQ96BS2 214 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 FOXN4Q96NZ1 517 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 NEDD4LQ96PU5 975 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 PCDHGB6Q9Y5F9 930 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 PEX16Q9Y5Y5 336 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 PLXNB2O15031 1838 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 POLEQ07864 2286 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 A0A1W2PRG6 482 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 OTOL1A6NHN0 477 aaPredicted RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 WISP3O95389 354 aaPredicted RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 GNSP15586 552 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 CSNK2A2P19784 350 aaPredicted RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 MPIP34949 423 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 GGT2P36268 569 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 RPL3P39023 403 aaKnown RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 ARL4DP49703 201 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 ITGA1P56199 1179 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 STXBP1P61764 594 aaKnown RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 CHRNEQ04844 493 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 PODNL1Q6PEZ8 512 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 ZNF517Q6ZMY9 492 aaPredicted RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 TAF8Q7Z7C8 310 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 SYT9Q86SS6 491 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 GLCCI1Q86VQ1 547 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 COX18Q8N8Q8 333 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 GOLM1Q8NBJ4 401 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 OR52L1Q8NGH7 329 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 OR5M3Q8NGP4 307 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 OR6Q1Q8NGQ2 317 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 CCL4L1Q8NHW4 92 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 GAL3ST4Q96RP7 486 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 C12orf4Q9NQ89 552 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms