RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 ZNF639Q9UID6 485 aa14.63□□□□□ -0.07
MRPL55-202ENST00000336300 EXO1Q9UQ84 846 aaKnown RBP14.63□□□□□ -0.07
MRPL55-202ENST00000336300 KLF13Q9Y2Y9 288 aaPredicted RBP14.63□□□□□ -0.07
MRPL55-202ENST00000336300 ZNF462Q96JM2 2506 aa14.63□□□□□ -0.07
MRPL55-202ENST00000336300 PLOD3O60568 738 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 COQ9O75208 318 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 CLPSP04118 112 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 SOX3P41225 446 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 TMED10P49755 219 aaKnown RBP14.62□□□□□ -0.07
MRPL55-202ENST00000336300 NR0B1P51843 470 aaKnown RBP14.62□□□□□ -0.07
MRPL55-202ENST00000336300 MRPS35P82673 323 aaKnown RBP14.62□□□□□ -0.07
MRPL55-202ENST00000336300 DUSP2Q05923 314 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 PTGR1Q14914 329 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 EXOSC7Q15024 291 aaKnown RBP14.62□□□□□ -0.07
MRPL55-202ENST00000336300 LTB4RQ15722 352 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 CPTPQ5TA50 214 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 RTL4Q6ZR62 310 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 WDR75Q8IWA0 830 aaKnown RBP14.62□□□□□ -0.07
MRPL55-202ENST00000336300 ARFGAP2Q8N6H7 521 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 KAT2AQ92830 837 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 MIB2Q96AX9 1013 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 C7orf26Q96N11 449 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 AMDHD1Q96NU7 426 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 ASF1BQ9NVP2 202 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 ATP6V1HQ9UI12 483 aa14.62□□□□□ -0.07
MRPL55-202ENST00000336300 CROCCQ5TZA2 2017 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 A0A087WV62 115 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 PLOD2O00469 737 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 SCAMP2O15127 329 aaKnown RBP14.61□□□□□ -0.07
MRPL55-202ENST00000336300 ATP8B1O43520 1251 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 NME2P1O60361 137 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 OR6B1O95007 311 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 P04436 131 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 G6PDP11413 515 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 NME2P22392 152 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 PTGER1P34995 402 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 PSPHP78330 225 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 RPP38P78345 283 aaKnown RBP14.61□□□□□ -0.07
MRPL55-202ENST00000336300 FOXK1P85037 733 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 PDE7AQ13946 482 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 ELOAQ14241 798 aaKnown RBP14.61□□□□□ -0.07
MRPL55-202ENST00000336300 IGFBP7Q16270 282 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 NXNQ6DKJ4 435 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 ANKRD26P1Q6NSI1 321 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 GALNTL5Q7Z4T8 443 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 SPATA19Q7Z5L4 167 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 GOLM1Q8NBJ4 401 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 GRHL3Q8TE85 626 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 FAR1Q8WVX9 515 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 HSPBAP1Q96EW2 488 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 LCORQ96JN0 433 aaPredicted RBP14.61□□□□□ -0.07
MRPL55-202ENST00000336300 ACSS1Q9NUB1 689 aaPredicted RBP14.61□□□□□ -0.07
MRPL55-202ENST00000336300 OLAHQ9NV23 265 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 DDX18Q9NVP1 670 aaKnown RBP14.61□□□□□ -0.07
MRPL55-202ENST00000336300 ZNF446Q9NWS9 450 aa14.61□□□□□ -0.07
MRPL55-202ENST00000336300 PRRC2CQ9Y520 2896 aaKnown RBP14.6□□□□□ -0.07
MRPL55-202ENST00000336300 TP53I11O14683 189 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 ACOX3O15254 700 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 CBX7O95931 251 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 IFI6P09912 130 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 GPX3P22352 226 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 PPICP45877 212 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 CLDN8P56748 225 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 HSPB3Q12988 150 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 RPS6KA2Q15349 733 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 ZNHIT3Q15649 155 aaPredicted RBP14.6□□□□□ -0.07
MRPL55-202ENST00000336300 LSM12Q3MHD2 195 aaKnown RBP14.6□□□□□ -0.07
MRPL55-202ENST00000336300 PRR30Q53SZ7 412 aaPredicted RBP14.6□□□□□ -0.07
MRPL55-202ENST00000336300 SLC22A10Q63ZE4 541 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 TMEM107Q6UX40 140 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 LARP4Q71RC2 724 aaKnown RBP eCLIP14.6□□□□□ -0.07
MRPL55-202ENST00000336300 POGLUT1Q8NBL1 392 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 GALNT11Q8NCW6 608 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 PSD4Q8NDX1 1056 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 ADIPOR1Q96A54 375 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 CIDECQ96AQ7 238 aaPredicted RBP14.6□□□□□ -0.07
MRPL55-202ENST00000336300 SPACA9Q96E40 222 aaPredicted RBP14.6□□□□□ -0.07
MRPL55-202ENST00000336300 ELP4Q96EB1 424 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 MAGEB18Q96M61 343 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 DPY30Q9C005 99 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 C3orf14Q9HBI5 128 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 MED4Q9NPJ6 270 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 SACM1LQ9NTJ5 587 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 NPFFR2Q9Y5X5 522 aa14.6□□□□□ -0.07
MRPL55-202ENST00000336300 A0A1W2PRB8 838 aa14.59□□□□□ -0.07
MRPL55-202ENST00000336300 TCP11X1B4DZS4 312 aa14.59□□□□□ -0.07
MRPL55-202ENST00000336300 PEX1O43933 1283 aa14.59□□□□□ -0.07
MRPL55-202ENST00000336300 WISP1O95388 367 aa14.59□□□□□ -0.07
MRPL55-202ENST00000336300 TGDSO95455 350 aa14.59□□□□□ -0.07
MRPL55-202ENST00000336300 FBXO45P0C2W1 286 aa14.59□□□□□ -0.07
MRPL55-202ENST00000336300 DRD5P21918 477 aa14.59□□□□□ -0.07
MRPL55-202ENST00000336300 EPHA3P29320 983 aa14.59□□□□□ -0.07
MRPL55-202ENST00000336300 MC3RP41968 323 aa14.59□□□□□ -0.07
MRPL55-202ENST00000336300 EMDP50402 254 aa14.59□□□□□ -0.07
MRPL55-202ENST00000336300 MLC1Q15049 377 aa14.59□□□□□ -0.07
MRPL55-202ENST00000336300 PRSS53Q2L4Q9 553 aa14.59□□□□□ -0.07
MRPL55-202ENST00000336300 OGFOD2Q6N063 350 aa14.59□□□□□ -0.07
MRPL55-202ENST00000336300 MDGA2Q7Z553 956 aa14.59□□□□□ -0.07
MRPL55-202ENST00000336300 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.59□□□□□ -0.07
MRPL55-202ENST00000336300 ZNF441Q8N8Z8 693 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms