RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 NUP43Q8NFH3 380 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 OR6T1Q8NGN1 323 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 APH1BQ8WW43 257 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 MTERF3Q96E29 417 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 TMEM38AQ9H6F2 299 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 FBXO34Q9NWN3 711 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 OR6C2Q9NZP2 312 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 SNX7Q9UNH6 387 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 FREM2Q5SZK8 3169 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 CPSF4LA6NMK7 179 aaKnown RBP11.84□□□□□ -0.51
LIMK1-201ENST00000336180 SOX1O00570 391 aaPredicted RBP11.84□□□□□ -0.51
LIMK1-201ENST00000336180 PROM1O43490 865 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 ABCB7O75027 752 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 TNFP01375 233 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 KIAA1024LP59773 190 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 HHEXQ03014 270 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 MAD2L1BPQ15013 274 aaPredicted RBP11.84□□□□□ -0.51
LIMK1-201ENST00000336180 DEFB133Q30KQ1 61 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 SOWAHCQ53LP3 525 aaPredicted RBP11.84□□□□□ -0.51
LIMK1-201ENST00000336180 TCTN3Q6NUS6 607 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 APLFQ8IW19 511 aaPredicted RBP11.84□□□□□ -0.51
LIMK1-201ENST00000336180 FLVCR1-AS1Q8TAF5 88 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 GEMIN6Q8WXD5 167 aaKnown RBP11.84□□□□□ -0.51
LIMK1-201ENST00000336180 PIP5K1AQ99755 562 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 PADI2Q9Y2J8 665 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 A6NCN8 305 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 RDH16O75452 317 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 SLC35G6P0C7Q6 338 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 HSMCR30P0CW71 290 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 NR2F6P10588 404 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 XCR1P46094 333 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 GP2P55259 537 aaKnown RBP11.83□□□□□ -0.52
LIMK1-201ENST00000336180 FOXL2P58012 376 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 ZNF614Q8N883 585 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 OR9A4Q8NGU2 314 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 LMX1AQ8TE12 382 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 GIMAP1Q8WWP7 306 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 NCSTNQ92542 709 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 PIK3R3Q92569 461 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 HDAC2Q92769 488 aaKnown RBP11.83□□□□□ -0.52
LIMK1-201ENST00000336180 NECTIN4Q96NY8 510 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 OR2A5Q96R48 311 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 VCX3AQ9NNX9 186 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 NDUFA13Q9P0J0 144 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 HCN3Q9P1Z3 774 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 ENPP4Q9Y6X5 453 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 EPPINO95925 133 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 CSNK2A2P19784 350 aaPredicted RBP11.83□□□□□ -0.52
LIMK1-201ENST00000336180 PPP2R1BP30154 601 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 CD6P30203 668 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 ENTPD1P49961 510 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 MICAQ29983 383 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 ANKDD1AQ495B1 522 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 PRAMEF17Q5VTA0 474 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 MLIPQ5VWP3 458 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 SLC48A1Q6P1K1 146 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 P3H2Q8IVL5 708 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 CDS1Q92903 461 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 FUNDC2Q9BWH2 189 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 RAB11FIP5Q9BXF6 653 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 C8orf33Q9H7E9 229 aaPredicted RBP11.83□□□□□ -0.52
LIMK1-201ENST00000336180 UBE2ZQ9H832 354 aaPredicted RBP11.83□□□□□ -0.52
LIMK1-201ENST00000336180 NEUROD4Q9HD90 331 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 NAALAD2Q9Y3Q0 740 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 ZNF780BQ9Y6R6 833 aa11.83□□□□□ -0.52
LIMK1-201ENST00000336180 ADAMDEC1O15204 470 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 JRKO75564 520 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 CCNB2O95067 398 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 WNT1P04628 370 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 CTSKP43235 329 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 CD97P48960 835 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 PDX1P52945 283 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 RGS1Q08116 209 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 SPCS2Q15005 226 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 GPR68Q15743 365 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 CRB2Q5IJ48 1285 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 FAHD1Q6P587 224 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 CLIP4Q8N3C7 705 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 OR4C15Q8NGM1 316 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 KLHL6Q8WZ60 621 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 SCARF2Q96GP6 870 aaPredicted RBP11.82□□□□□ -0.52
LIMK1-201ENST00000336180 OR7D2Q96RA2 312 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 CCDC3Q9BQI4 270 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 EPB41L1Q9H4G0 881 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 RERGLQ9H628 205 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 QPCTLQ9NXS2 382 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 DUSP12Q9UNI6 340 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 DOLKQ9UPQ8 538 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 MAPRE3Q9UPY8 281 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 SLC9B1P1A6NJY1 282 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 J3QRK9 145 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 SLC16A6O15403 523 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 UGT2B11O75310 529 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 ZIC2O95409 532 aaPredicted RBP11.82□□□□□ -0.52
LIMK1-201ENST00000336180 APBB3O95704 486 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 STSP08842 583 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 ADRA2AP08913 450 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 CHRNB1P11230 501 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms