RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 SCARB2Q14108 478 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 PROX2Q3B8N5 592 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 PRAMEF14Q5SWL7 426 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 GARNL3Q5VVW2 1013 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 PRAMEF13Q5VWM6 474 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 TYW3Q6IPR3 259 aaKnown RBP13.15□□□□□ -0.3
SF1-202ENST00000334944 ERICH5Q6P6B1 374 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 TMIGD1Q6UXZ0 262 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 ADCK2Q7Z695 626 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 TSPYL5Q86VY4 417 aaPredicted RBP13.15□□□□□ -0.3
SF1-202ENST00000334944 TFGQ92734 400 aaPredicted RBP13.15□□□□□ -0.3
SF1-202ENST00000334944 FGF13Q92913 245 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 RAB8BQ92930 207 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 OTUB2Q96DC9 234 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 PRKAG2Q9UGJ0 569 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 CFL2Q9Y281 166 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 A3GALT2U3KPV4 340 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 PRAMEF33A0A0G2JMD5 474 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 CXorf51AA0A1B0GTR3 108 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 FGF19O95750 216 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 C1QBP02746 253 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 CA3P07451 260 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 CKMT1AP12532 417 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 LRRC74AQ0VAA2 488 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 KEAP1Q14145 624 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 ELAVL3Q14576 367 aaKnown RBP13.14□□□□□ -0.31
SF1-202ENST00000334944 IGSF11Q5DX21 431 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 PDZK1Q5T2W1 519 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 ZBTB37Q5TC79 503 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 HIST2H2AA3Q6FI13 130 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 MSANTD1Q6ZTZ1 278 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 GTPBP3Q969Y2 492 aaKnown RBP13.14□□□□□ -0.31
SF1-202ENST00000334944 DIRAS2Q96HU8 199 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 LRIG1Q96JA1 1093 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 NIPSNAP1Q9BPW8 284 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 DOHHQ9BU89 302 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 DPCDQ9BVM2 203 aaPredicted RBP13.14□□□□□ -0.31
SF1-202ENST00000334944 IGFLR1Q9H665 355 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 SERGEFQ9UGK8 458 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 PSORS1C1Q9UIG5 152 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 BTNL2Q9UIR0 455 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 TNFRSF11BO00300 401 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 TSPAN19P0C672 248 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 MAN2A2P49641 1150 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 MAP2K6P52564 334 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 ITGA1P56199 1179 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 HSPB3Q12988 150 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 TNK1Q13470 666 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 FGFBP1Q14512 234 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 ZC3H12BQ5HYM0 836 aaKnown RBP13.14□□□□□ -0.31
SF1-202ENST00000334944 C6orf132Q5T0Z8 1188 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 ANXA8L1Q5VT79 327 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 LRRC56Q8IYG6 542 aaPredicted RBP13.14□□□□□ -0.31
SF1-202ENST00000334944 SETD6Q8TBK2 473 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 CXorf40AQ8TE69 158 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 IPCEF1Q8WWN9 437 aaPredicted RBP13.14□□□□□ -0.31
SF1-202ENST00000334944 SGPP1Q9BX95 441 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 ZCCHC2Q9C0B9 1178 aaKnown RBP13.14□□□□□ -0.31
SF1-202ENST00000334944 ZNF304Q9HCX3 659 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 MYO10Q9HD67 2058 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 LOC102723532A0A0G2JNH3 316 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 A0A1W2PRB8 838 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 SERTM1A2A2V5 107 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 TOR1AO14656 332 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 FABP7O15540 132 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 PRAMEF10O60809 474 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 B3GALNT1O75752 331 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 HSD3B1P14060 373 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 HSD3B2P26439 372 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 ACADLP28330 430 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 TALDO1P37837 337 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 TBCEQ15813 527 aaPredicted RBP13.14□□□□□ -0.31
SF1-202ENST00000334944 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.14□□□□□ -0.317e-8■■□□□ 13.2
SF1-202ENST00000334944 TMEM81Q6P7N7 255 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 ERN2Q76MJ5 926 aaKnown RBP13.14□□□□□ -0.31
SF1-202ENST00000334944 NRSN1Q8IZ57 195 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 TCTE3Q8IZS6 198 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 RDH10Q8IZV5 341 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 AMER3Q8N944 861 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 ZNF680Q8NEM1 530 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 SUSD6Q92537 303 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 CHFRQ96EP1 664 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 MGLLQ99685 303 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 EFCAB11Q9BUY7 163 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 SLAMF7Q9NQ25 335 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 MBNL1Q9NR56 388 aaKnown RBP13.14□□□□□ -0.31
SF1-202ENST00000334944 ATP6V1HQ9UI12 483 aa13.14□□□□□ -0.31
SF1-202ENST00000334944 FABP12A6NFH5 140 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 GLOD5A6NK44 160 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 SH3BP5O60239 455 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 PRKRAO75569 313 aaKnown RBP13.13□□□□□ -0.31
SF1-202ENST00000334944 PAK4O96013 591 aaPredicted RBP13.13□□□□□ -0.31
SF1-202ENST00000334944 C9P02748 559 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 CDK1P06493 297 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 TRAPPC2P0DI81 140 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 TRAPPC2BP0DI82 140 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 ALPPL2P10696 532 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 IL1RNP18510 177 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 ETV6P41212 452 aa13.13□□□□□ -0.31
SF1-202ENST00000334944 MRPL28Q13084 256 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms