RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CD27P26842 260 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 ATP6AP1Q15904 470 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 SLC36A3Q495N2 470 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 C6orf132Q5T0Z8 1188 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 ZNF101Q8IZC7 436 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 JAGN1Q8N5M9 183 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 OR9A4Q8NGU2 314 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 MALT1Q9UDY8 824 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 EMCNQ9ULC0 261 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 NME7Q9Y5B8 376 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 DPPA5A6NC42 116 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 UNC119BA6NIH7 251 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 H0YGG7 62 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 CCR2P41597 374 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 SLC15A1P46059 708 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 ARF3P61204 181 aaPredicted RBP14.24□□□□□ -0.13
C9orf47-201ENST00000334490 RPS3AP61247 264 aaKnown RBP14.24□□□□□ -0.13
C9orf47-201ENST00000334490 PRR22Q8IZ63 422 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 OR2L8Q8NGY9 312 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 IFT46Q9NQC8 304 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 PTBP2Q9UKA9 531 aaKnown RBP14.24□□□□□ -0.13
C9orf47-201ENST00000334490 FKBP7Q9Y680 259 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 TOR1BO14657 336 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 PROM1O43490 865 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 SPARCP09486 303 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 PTGER1P34995 402 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 ARFRP1Q13795 201 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 RGNQ15493 299 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 CARD17Q5XLA6 110 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 NSMAFQ92636 917 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 IL21Q9HBE4 155 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 SESN1Q9Y6P5 492 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 SRFP11831 508 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 OR1D4P47884 311 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 OR14L1PQ8NHC6 308 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 SORT1Q99523 831 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 TMED9Q9BVK6 235 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 MND1Q9BWT6 205 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 SRA1Q9HD15 236 aaKnown RBP14.23□□□□□ -0.13
C9orf47-201ENST00000334490 SRPX2O60687 465 aaPredicted RBP14.23□□□□□ -0.13
C9orf47-201ENST00000334490 ARL6IP5O75915 188 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 HMGN2P05204 90 aaKnown RBP14.23□□□□□ -0.13
C9orf47-201ENST00000334490 HTR1AP08908 422 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 ZNF84P51523 738 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 MVKQ03426 396 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 BLMHQ13867 455 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 PAGE3Q5JUK9 113 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 BICRALQ6AI39 1079 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 RNF175Q8N4F7 328 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 INTS6Q9UL03 887 aaKnown RBP14.23□□□□□ -0.13
C9orf47-201ENST00000334490 SOCS2O14508 198 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 CSTBP04080 98 aaKnown RBP14.23□□□□□ -0.13
C9orf47-201ENST00000334490 MRPL3P09001 348 aaKnown RBP14.23□□□□□ -0.13
C9orf47-201ENST00000334490 CBX3Q13185 183 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 DSG2Q14126 1118 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 E2F2Q14209 437 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 HORMAD2Q8N7B1 307 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 PHF12Q96QT6 1004 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 FOXQ1Q9C009 403 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 DIABLOQ9NR28 239 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 CDK5RAP2Q96SN8 1893 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 SMCHD1A6NHR9 2005 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 PAPPAQ13219 1627 aa14.23□□□□□ -0.13
C9orf47-201ENST00000334490 A0A1B0GVI7 797 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 ZNF879B4DU55 563 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 LHCGRP22888 699 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 IMPA1P29218 277 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 SELENOVP59797 346 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 ZNF100Q8IYN0 542 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 SLC5A8Q8N695 610 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 ZNF283Q8N7M2 679 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 NAXEQ8NCW5 288 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 EGLN2Q96KS0 407 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 GABBR2O75899 941 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 HLA-DPB1P04440 258 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 AP3S2P59780 193 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 ADAM8P78325 824 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 TAP2Q03519 686 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 TSTQ16762 297 aaKnown RBP14.22□□□□□ -0.13
C9orf47-201ENST00000334490 USP43Q70EL4 1123 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 UBXN10Q96LJ8 280 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 NAA11Q9BSU3 229 aaPredicted RBP14.22□□□□□ -0.13
C9orf47-201ENST00000334490 C6orf106Q9H6K1 298 aaPredicted RBP14.22□□□□□ -0.13
C9orf47-201ENST00000334490 CUTCQ9NTM9 273 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 LAMB1P07942 1786 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 NME4O00746 187 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 UGT2B7P16662 529 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 AHRP35869 848 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 RORCP51449 518 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 ADPRHP54922 357 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 MEDAGQ5VYS4 303 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 TLDC1Q6P9B6 456 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 QSOX2Q6ZRP7 698 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 PLPP6Q8IY26 295 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 MFSD2AQ8NA29 543 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 HTRA1Q92743 480 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 TCTN2Q96GX1 697 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 ZNF559Q9BR84 538 aa14.22□□□□□ -0.13
C9orf47-201ENST00000334490 NPLQ9BXD5 320 aaPredicted RBP14.22□□□□□ -0.13
C9orf47-201ENST00000334490 SLC6A16Q9GZN6 736 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms