RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 ACP5P13686 325 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 F3P13726 295 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 CSNK2A2P19784 350 aaPredicted RBP10.12□□□□□ -0.79
CCDC172-201ENST00000333254 MMP11P24347 488 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 PSMA1P25786 263 aaKnown RBP10.12□□□□□ -0.79
CCDC172-201ENST00000333254 NDUFS1P28331 727 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 CMPK1P30085 196 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 GIPRP48546 466 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 SMSP52788 366 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 DEFA1P59665 94 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 DEFA3P59666 94 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 STXBP1P61764 594 aaKnown RBP10.12□□□□□ -0.79
CCDC172-201ENST00000333254 BNC1Q01954 994 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 TARDBPQ13148 414 aaKnown RBP eCLIP10.12□□□□□ -0.79
CCDC172-201ENST00000333254 LEXMQ3ZCV2 418 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 SPANXN2Q5MJ10 180 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 PODNL1Q6PEZ8 512 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 WASH2PQ6VEQ5 465 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 UBE2Q1Q7Z7E8 422 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 ZER1Q7Z7L7 766 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 ADGRD2Q7Z7M1 963 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 SAMD14Q8IZD0 417 aaPredicted RBP10.12□□□□□ -0.79
CCDC172-201ENST00000333254 NLGN4XQ8N0W4 816 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 HDDC3Q8N4P3 179 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 PARP16Q8N5Y8 322 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 AMER3Q8N944 861 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 ACOT4Q8N9L9 421 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 OR52E1Q8NGJ3 308 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 XAGE5Q8WWM1 108 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 CHFRQ96EP1 664 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 TSSK6Q9BXA6 273 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 ROGDIQ9GZN7 287 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 ARMC7Q9H6L4 198 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 TRIM45Q9H8W5 580 aaPredicted RBP10.12□□□□□ -0.79
CCDC172-201ENST00000333254 C5AR2Q9P296 337 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 SNX7Q9UNH6 387 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 IQCMA0A1B0GVH7 501 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 A0A1W2PR48 441 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 TMEM129A0AVI4 362 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 GSAPA4D1B5 854 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 H3BN98 237 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 M0R129 80 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 STK25O00506 426 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 ERI3O43414 337 aaKnown RBP10.12□□□□□ -0.79
CCDC172-201ENST00000333254 TPST2O60704 377 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 GPX5O75715 221 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 RAB36O95755 333 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 AIFM1O95831 613 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 CHRM4P08173 479 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 POU1F1P28069 291 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 PRKAR1BP31321 381 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 TNFRSF4P43489 277 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 KIAA1024LP59773 190 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 SLAMF1Q13291 335 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 FGL2Q14314 439 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 STEAP3Q658P3 488 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 TANGO2Q6ICL3 276 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 RASSF6Q6ZTQ3 369 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 ADCK2Q7Z695 626 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 RBM45Q8IUH3 476 aaKnown RBP10.12□□□□□ -0.79
CCDC172-201ENST00000333254 C12orf76Q8N812 135 aaPredicted RBP10.12□□□□□ -0.79
CCDC172-201ENST00000333254 ST13P5Q8NFI4 369 aaPredicted RBP10.12□□□□□ -0.79
CCDC172-201ENST00000333254 VANGL1Q8TAA9 524 aaPredicted RBP10.12□□□□□ -0.79
CCDC172-201ENST00000333254 NT5CQ8TCD5 201 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 GNPDA2Q8TDQ7 276 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 GAL3ST3Q96A11 431 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 CNRIP1Q96F85 164 aaPredicted RBP10.12□□□□□ -0.79
CCDC172-201ENST00000333254 ZNF681Q96N22 645 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 IL4I1Q96RQ9 567 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 POLR2J2Q9GZM3 115 aaKnown RBP10.12□□□□□ -0.79
CCDC172-201ENST00000333254 NUAK2Q9H093 628 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 SYNDIG1Q9H7V2 258 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 IMP3Q9NV31 184 aaKnown RBP10.12□□□□□ -0.79
CCDC172-201ENST00000333254 MED17Q9NVC6 651 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 OR6C2Q9NZP2 312 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 DNAJC27Q9NZQ0 273 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 TRPC4Q9UBN4 977 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 KLHL3Q9UH77 587 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 KLHL20Q9Y2M5 609 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 PCDHGB6Q9Y5F9 930 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 SNX11Q9Y5W9 270 aa10.12□□□□□ -0.79
CCDC172-201ENST00000333254 LRP4O75096 1905 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 TMEM221A6NGB7 291 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 PDZK1P1A8MUH7 402 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 C4orf51C9J302 202 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 MYL12BO14950 172 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 PRODHO43272 600 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 TBX1O43435 398 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 IL1AP01583 271 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 HMGN2P05204 90 aaKnown RBP10.11□□□□□ -0.79
CCDC172-201ENST00000333254 HSMCR30P0CW71 290 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 IFNA8P32881 189 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 MPIP34949 423 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 CRYBB2P43320 205 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 GAS1P54826 345 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 RAB40BQ12829 278 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 TSPAN31Q12999 210 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 PIN1Q13526 163 aaPredicted RBP10.11□□□□□ -0.79
CCDC172-201ENST00000333254 TRAM2Q15035 370 aa10.11□□□□□ -0.79
CCDC172-201ENST00000333254 RPE65Q16518 533 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms