RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 SLCO4C1Q6ZQN7 724 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 NOXA1Q86UR1 476 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 KLHDC8BQ8IXV7 354 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 CHFRQ96EP1 664 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 NFKBIL1Q9UBC1 381 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-201ENST00000323668 FLRT2O43155 660 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 IL1AP01583 271 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 CYP17A1P05093 508 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 HMGA1P17096 107 aaKnown RBP13.99□□□□□ -0.17
TCOF1-201ENST00000323668 EDNRAP25101 427 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 GPR4P46093 362 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 ERVK-21P61565 698 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 SLC7A9P82251 487 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 GRIN2CQ14957 1233 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 CTF1Q16619 201 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 COX20Q5RI15 118 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 SPATC1Q76KD6 591 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 CEACAM19Q7Z692 300 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 AMIGO1Q86WK6 493 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 CAMKVQ8NCB2 501 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 ZNF248Q8NDW4 579 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 OR4K14Q8NGD5 310 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 OR8K5Q8NH50 307 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 FAM46AQ96IP4 442 aaKnown RBP13.99□□□□□ -0.17
TCOF1-201ENST00000323668 ACTL8Q9H568 366 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 FOLH1BQ9HBA9 442 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 ZNF334Q9HCZ1 680 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-201ENST00000323668 LYRM1O43325 122 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 CNIH2Q6PI25 160 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 CYHR1Q6ZMK1 362 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 NRROSQ86YC3 692 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 GPALPP1Q8IXQ4 340 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 MOSPD2Q8NHP6 518 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 CREB3L1Q96BA8 519 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 SLC46A2Q9BY10 475 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 MYO9BQ13459 2157 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 XKRYO14609 159 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 SSTR4P31391 388 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 KCT2Q8NC54 265 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 FANK1Q8TC84 345 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 RAB7BQ96AH8 199 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 TXNDC15Q96J42 360 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 GINS4Q9BRT9 223 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 AKIP1Q9NQ31 210 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 LYARQ9NX58 379 aaKnown RBP13.98□□□□□ -0.17
TCOF1-201ENST00000323668 WNK3Q9BYP7 1800 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 ITGA10O75578 1167 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 SEMA3DO95025 777 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 CFL1P23528 166 aaKnown RBP13.98□□□□□ -0.17
TCOF1-201ENST00000323668 DHCR24Q15392 516 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 LCTLQ6UWM7 567 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 TIGD4Q8IY51 512 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 SLC39A11Q8N1S5 342 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 SYNPOQ8N3V7 929 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 DTX3Q8N9I9 347 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 C7orf57Q8NEG2 295 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 FUZQ9BT04 418 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 TRBV4-1A0A0J9YWV2 114 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 MRPL3P09001 348 aaKnown RBP13.98□□□□□ -0.17
TCOF1-201ENST00000323668 ACPPP15309 386 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 PYCR1P32322 319 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 RAB40BQ12829 278 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 DPPA4Q7L190 304 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 SLC9B2Q86UD5 537 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 HORMAD2Q8N7B1 307 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 OR51A7Q8NH64 312 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 TSEN15Q8WW01 171 aaKnown RBP13.98□□□□□ -0.17
TCOF1-201ENST00000323668 BEX1Q9HBH7 125 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 CKLFQ9UBR5 152 aa13.98□□□□□ -0.17
TCOF1-201ENST00000323668 GON4LQ3T8J9 2241 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 FURINP09958 794 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 ANXA3P12429 323 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 EPHA2P29317 976 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 PODNL1Q6PEZ8 512 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 ABHD13Q7L211 337 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 NEURL2Q9BR09 285 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 COMMD4Q9H0A8 199 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 PELI2Q9HAT8 420 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 CNIH4Q9P003 139 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 FAM47E-STBD1D6RA91 191 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 LRRN3E7EW58 273 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 HTR2BP41595 481 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 RPA4Q13156 261 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 INAVAQ3KP66 663 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 ENPP7Q6UWV6 458 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 CCDC28AQ8IWP9 274 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 ZNF683Q8IZ20 524 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 OR5D16Q8NGK9 328 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 FOXJ1Q92949 421 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 RSPH9Q9H1X1 276 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-201ENST00000323668 LRRN3Q9H3W5 708 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 DPEP2Q9H4A9 486 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 PLCXD1Q9NUJ7 323 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 C14orf105Q9NVL8 296 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 PCDHGB2Q9Y5G2 931 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 TACSTD2P09758 323 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 SLC6A6P31641 620 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 TRAM1Q15629 374 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 NRMQ8IXM6 262 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 KLHDC8AQ8IYD2 350 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms