RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 ZNF556Q9HAH1 456 aa15□□□□□ -0.01
SHISA2-201ENST00000319420 NMNAT1Q9HAN9 279 aaPredicted RBP15□□□□□ -0.01
SHISA2-201ENST00000319420 ACSS1Q9NUB1 689 aaPredicted RBP15□□□□□ -0.01
SHISA2-201ENST00000319420 PCDHGA6Q9Y5G7 932 aa15□□□□□ -0.01
SHISA2-201ENST00000319420 PCDHGA10Q9Y5H3 936 aa15□□□□□ -0.01
SHISA2-201ENST00000319420 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.99□□□□□ -0.01
SHISA2-201ENST00000319420 OR2A25A4D2G3 310 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 SYNDIG1LA6NDD5 238 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 TNFRSF10CO14798 259 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 NDUFS2O75306 463 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 GASTP01350 101 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 CCDC159P0C7I6 412 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 ST6GAL1P15907 406 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 KRT20P35900 424 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 MLLT10P55197 1068 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 SLC35A2P78381 396 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 SHC2P98077 582 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 TOP3AQ13472 1001 aaPredicted RBP14.99□□□□□ -0.01
SHISA2-201ENST00000319420 KIR2DS3Q14952 304 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 ANKDD1AQ495B1 522 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 MRM1Q6IN84 353 aaKnown RBP14.99□□□□□ -0.01
SHISA2-201ENST00000319420 FAM111BQ6SJ93 734 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 SLC16A12Q6ZSM3 486 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 ENTHD1Q8IYW4 607 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 SLC16A11Q8NCK7 471 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 SRFBP1Q8NEF9 429 aaKnown RBP14.99□□□□□ -0.01
SHISA2-201ENST00000319420 LMX1AQ8TE12 382 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 APOL4Q9BPW4 351 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 ARPC5LQ9BPX5 153 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 ZFYVE21Q9BQ24 234 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 NAALAD2Q9Y3Q0 740 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 ENPP4Q9Y6X5 453 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 CACNA1IQ9P0X4 2223 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 TRIM64BA6NI03 449 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 SOX1O00570 391 aaPredicted RBP14.99□□□□□ -0.01
SHISA2-201ENST00000319420 CASC3O15234 703 aaKnown RBP14.99□□□□□ -0.01
SHISA2-201ENST00000319420 FCMRO60667 390 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 CCNA2P20248 432 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 CDH3P22223 829 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 SMAD4Q13485 552 aaKnown RBP14.99□□□□□ -0.01
SHISA2-201ENST00000319420 SPCS2Q15005 226 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 MICAQ29983 383 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 SETD9Q8NE22 299 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 OR4C15Q8NGM1 316 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 TBC1D15Q8TC07 691 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 ASB12Q8WXK4 309 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 LRRC61Q9BV99 259 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 C11orf16Q9NQ32 467 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 PCDHGA2Q9Y5H1 932 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 GUCY1B2O75343 617 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 MT-ND2P03891 347 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 MYF5P13349 255 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 ITGA2P17301 1181 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 XCR1P46094 333 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 AVPR1BP47901 424 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 TMBIM6P55061 237 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 TGM3Q08188 693 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 SEC23BQ15437 767 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 DEFB133Q30KQ1 61 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 TRMT12Q53H54 448 aaKnown RBP14.99□□□□□ -0.01
SHISA2-201ENST00000319420 TCTN3Q6NUS6 607 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 ARMC6Q6NXE6 501 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 ZC3H14Q6PJT7 736 aaKnown RBP14.99□□□□□ -0.01
SHISA2-201ENST00000319420 P3H2Q8IVL5 708 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 SIX5Q8N196 739 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 TMEM52Q8NDY8 209 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 OR7G2Q8NG99 324 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 ZNF566Q969W8 418 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 ZNF607Q96SK3 696 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 DUSP21Q9H596 190 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 PCOLCE2Q9UKZ9 415 aa14.99□□□□□ -0.01
SHISA2-201ENST00000319420 UNC13CQ8NB66 2214 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 A0A1W2PPC4 97 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 KRBA1A5PL33 1030 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 C2orf74A8MZ97 194 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 H3BN98 237 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 RPL6Q02878 288 aaKnown RBP14.98□□□□□ -0.01
SHISA2-201ENST00000319420 MVKQ03426 396 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 CHRNEQ04844 493 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 FUT5Q11128 374 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 DCTN2Q13561 401 aaKnown RBP14.98□□□□□ -0.01
SHISA2-201ENST00000319420 ERV3-1Q14264 604 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 SUZ12Q15022 739 aaKnown RBP14.98□□□□□ -0.01
SHISA2-201ENST00000319420 DHRS4L2Q6PKH6 230 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 CCDC80Q76M96 950 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 C16orf62Q7Z3J2 963 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 TSPYL5Q86VY4 417 aaPredicted RBP14.98□□□□□ -0.01
SHISA2-201ENST00000319420 VRK2Q86Y07 508 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 GPBAR1Q8TDU6 330 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 GAL3ST3Q96A11 431 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 ELP4Q96EB1 424 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 IL4I1Q96RQ9 567 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 ZNF347Q96SE7 839 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 CES1P1Q9UKY3 287 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 PSME2Q9UL46 239 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.98□□□□□ -0.01
SHISA2-201ENST00000319420 RNF6Q9Y252 685 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 HS3ST3A1Q9Y663 406 aa14.98□□□□□ -0.01
SHISA2-201ENST00000319420 B3GALT2O43825 422 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms