RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 NR2F6P10588 404 aa7.34□□□□□ -1.23
CNOT4-201ENST00000315544 ALAS2P22557 587 aa7.34□□□□□ -1.23
CNOT4-201ENST00000315544 SLC6A11P48066 632 aa7.34□□□□□ -1.23
CNOT4-201ENST00000315544 TRA2BP62995 288 aaKnown RBP7.34□□□□□ -1.23
CNOT4-201ENST00000315544 ABATP80404 500 aa7.34□□□□□ -1.23
CNOT4-201ENST00000315544 IGLV3-21P80748 117 aaPredicted RBP7.34□□□□□ -1.23
CNOT4-201ENST00000315544 CHRNB3Q05901 458 aa7.34□□□□□ -1.23
CNOT4-201ENST00000315544 ARHGAP19Q14CB8 494 aa7.34□□□□□ -1.23
CNOT4-201ENST00000315544 LARS2Q15031 903 aaKnown RBP7.34□□□□□ -1.23
CNOT4-201ENST00000315544 FAM166AQ6J272 317 aa7.34□□□□□ -1.23
CNOT4-201ENST00000315544 ADGRG3Q86Y34 549 aa7.34□□□□□ -1.23
CNOT4-201ENST00000315544 CACTIN-AS1Q8N1I8 211 aa7.34□□□□□ -1.23
CNOT4-201ENST00000315544 LMNTD1Q8N9Z9 388 aa7.34□□□□□ -1.23
CNOT4-201ENST00000315544 ZNF486Q96H40 463 aaPredicted RBP7.34□□□□□ -1.23
CNOT4-201ENST00000315544 AMDHD1Q96NU7 426 aa7.34□□□□□ -1.23
CNOT4-201ENST00000315544 ZSCAN5AQ9BUG6 496 aa7.34□□□□□ -1.23
CNOT4-201ENST00000315544 EHD3Q9NZN3 535 aa7.34□□□□□ -1.23
CNOT4-201ENST00000315544 PDP1Q9P0J1 537 aaPredicted RBP7.34□□□□□ -1.23
CNOT4-201ENST00000315544 FBXW2Q9UKT8 454 aa7.34□□□□□ -1.23
CNOT4-201ENST00000315544 SNX6Q9UNH7 406 aa7.34□□□□□ -1.23
CNOT4-201ENST00000315544 IL1AP01583 271 aa7.34□□□□□ -1.24
CNOT4-201ENST00000315544 HOXC4P09017 264 aaPredicted RBP7.34□□□□□ -1.24
CNOT4-201ENST00000315544 C1GALT1C1LP0DN25 315 aa7.34□□□□□ -1.24
CNOT4-201ENST00000315544 NR4A1P22736 598 aa7.34□□□□□ -1.24
CNOT4-201ENST00000315544 MNDAP41218 407 aa7.34□□□□□ -1.24
CNOT4-201ENST00000315544 CTSKP43235 329 aa7.34□□□□□ -1.24
CNOT4-201ENST00000315544 SLAMF1Q13291 335 aa7.34□□□□□ -1.24
CNOT4-201ENST00000315544 RBBP7Q16576 425 aa7.34□□□□□ -1.24
CNOT4-201ENST00000315544 BCDIN3DQ7Z5W3 292 aaKnown RBP7.34□□□□□ -1.24
CNOT4-201ENST00000315544 PDZD3Q86UT5 571 aa7.34□□□□□ -1.24
CNOT4-201ENST00000315544 LAX1Q8IWV1 398 aa7.34□□□□□ -1.24
CNOT4-201ENST00000315544 TMEM132CQ8N3T6 1108 aa7.34□□□□□ -1.24
CNOT4-201ENST00000315544 OR6K2Q8NGY2 324 aa7.34□□□□□ -1.24
CNOT4-201ENST00000315544 EBPLQ9BY08 206 aa7.34□□□□□ -1.24
CNOT4-201ENST00000315544 CCDC177Q9NQR7 707 aaPredicted RBP7.34□□□□□ -1.24
CNOT4-201ENST00000315544 HAO2Q9NYQ3 351 aa7.34□□□□□ -1.24
CNOT4-201ENST00000315544 USP36Q9P275 1121 aaKnown RBP7.34□□□□□ -1.24
CNOT4-201ENST00000315544 ZNF282Q9UDV7 671 aaPredicted RBP7.34□□□□□ -1.24
CNOT4-201ENST00000315544 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 A0A1W2PQ67 120 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 OR5K3A6NET4 321 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 TGFBR3LH3BV60 316 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 TOR1BO14657 336 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 ZNF197O14709 1029 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 ZW10O43264 779 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 LEFTY1O75610 366 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 CRISP1P54107 249 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 CTBP2P56545 445 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 ZNF91Q05481 1191 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 ZNF177Q13360 481 aaPredicted RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 CDK10Q15131 360 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 NDUFA5Q16718 116 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 OR2L13Q8N349 312 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 Q8N9G6 341 aaPredicted RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 FAM120BQ96EK7 910 aaKnown RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 Q96MT0 163 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 KCNC2Q96PR1 638 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 DEPDC7Q96QD5 511 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 SEPT5Q99719 369 aaPredicted RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 DPY30Q9C005 99 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 LINC00597Q9H2U6 94 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 C8orf33Q9H7E9 229 aaPredicted RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 VPS4AQ9UN37 437 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 SLC17A4Q9Y2C5 497 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 WIPF3A6NGB9 483 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 GTPBP1O00178 669 aaKnown RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 WISP1O95388 367 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 CYP17A1P05093 508 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 HMBSP08397 361 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 ANXA5P08758 320 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 PRKCAP17252 672 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 AKT1P31749 480 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 MLLT3P42568 568 aaPredicted RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 RPS13P62277 151 aaKnown RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 CHIT1Q13231 466 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 ZNF630Q2M218 657 aaPredicted RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 TIMM50Q3ZCQ8 353 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 PLK5Q496M5 336 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 VN1R4Q7Z5H5 301 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 OR51Q1Q8NH59 317 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 NT5CQ8TCD5 201 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 HGDQ93099 445 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 CDCP1Q9H5V8 836 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 PLEKHA1Q9HB21 404 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 PRG3Q9Y2Y8 225 aaPredicted RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 TNRC6AQ8NDV7 1962 aaKnown RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 ZNF749O43361 778 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 MAN1A2O60476 641 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 TSPAN3O60637 253 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 UQCRC2P22695 453 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 LMO1P25800 156 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 MST1P26927 711 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 CNR2P34972 360 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 CLDN20P56880 219 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 CSNK1G2P78368 415 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 CYP4F8P98187 520 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 SRSF4Q08170 494 aaKnown RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 ST3GAL4Q11206 333 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 COL9A2Q14055 689 aaPredicted RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms