RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 PHF21BQ96EK2 531 aa7.48□□□□□ -1.21
TPM3-203ENST00000312970 JSRP1Q96MG2 331 aaPredicted RBP7.48□□□□□ -1.21
TPM3-203ENST00000312970 CDK15Q96Q40 435 aa7.48□□□□□ -1.21
TPM3-203ENST00000312970 LRRC1Q9BTT6 524 aa7.48□□□□□ -1.21
TPM3-203ENST00000312970 DOHHQ9BU89 302 aa7.48□□□□□ -1.21
TPM3-203ENST00000312970 NTMT1Q9BV86 223 aa7.48□□□□□ -1.21
TPM3-203ENST00000312970 ACSS3Q9H6R3 686 aa7.48□□□□□ -1.21
TPM3-203ENST00000312970 ZNF703Q9H7S9 590 aaPredicted RBP7.48□□□□□ -1.21
TPM3-203ENST00000312970 CXorf21Q9HAI6 301 aa7.48□□□□□ -1.21
TPM3-203ENST00000312970 ZDHHC18Q9NUE0 388 aa7.48□□□□□ -1.21
TPM3-203ENST00000312970 B4GALT7Q9UBV7 327 aa7.48□□□□□ -1.21
TPM3-203ENST00000312970 CNOT11Q9UKZ1 510 aaKnown RBP7.48□□□□□ -1.21
TPM3-203ENST00000312970 TMCO1Q9UM00 188 aa7.48□□□□□ -1.21
TPM3-203ENST00000312970 NPFFR2Q9Y5X5 522 aa7.48□□□□□ -1.21
TPM3-203ENST00000312970 PRRC2AP48634 2157 aaKnown RBP7.47□□□□□ -1.21
TPM3-203ENST00000312970 TMEM238LA0A1B0GVL6 79 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 LRRC3CA6NJW4 275 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 HSPB2A8KAH6 182 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 STX16-NPEPL1H3BU86 382 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 OR7A17O14581 309 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 STX16O14662 325 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 SMIM24O75264 130 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 GUCY1B2O75343 617 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 TRIM3O75382 744 aaPredicted RBP7.47□□□□□ -1.21
TPM3-203ENST00000312970 TRAPPC6AO75865 159 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 SEMA3DO95025 777 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 ZWINTO95229 277 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 ACSL3O95573 720 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 AIFM1O95831 613 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 EPPINO95925 133 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 CLPSP04118 112 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 KLK1P06870 262 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 COL6A2P12110 1019 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 PORP16435 677 aaPredicted RBP7.47□□□□□ -1.21
TPM3-203ENST00000312970 ENDOUP21128 410 aaKnown RBP7.47□□□□□ -1.21
TPM3-203ENST00000312970 GDF1P27539 372 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 SSTR4P31391 388 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 TRPC1P48995 793 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 TMED10P49755 219 aaKnown RBP7.47□□□□□ -1.21
TPM3-203ENST00000312970 DLX5P56178 289 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 NRG3P56975 720 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 FBXW4P57775 412 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 RPP38P78345 283 aaKnown RBP7.47□□□□□ -1.21
TPM3-203ENST00000312970 CKAP4Q07065 602 aaKnown RBP7.47□□□□□ -1.21
TPM3-203ENST00000312970 FUT7Q11130 342 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 IFT88Q13099 833 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 SF3B4Q15427 424 aaKnown RBP eCLIP7.47□□□□□ -1.211e-13■■□□□ 12.6
TPM3-203ENST00000312970 HSPB2Q16082 182 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 TECRLQ5HYJ1 363 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 CCNYL2Q5T2Q4 361 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 C10orf62Q5T681 223 aaPredicted RBP7.47□□□□□ -1.21
TPM3-203ENST00000312970 FRG2Q64ET8 278 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 OR52E8Q6IFG1 317 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 C8orf74Q6P047 294 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 ARSKQ6UWY0 536 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 TMEM64Q6YI46 380 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 PAGE2Q7Z2X7 111 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 MILR1Q7Z6M3 343 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 TMEM200AQ86VY9 491 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 ULK2Q8IYT8 1036 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 PLD6Q8N2A8 252 aaKnown RBP7.47□□□□□ -1.21
TPM3-203ENST00000312970 ZNF615Q8N8J6 731 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 PTGR2Q8N8N7 351 aaPredicted RBP7.47□□□□□ -1.21
TPM3-203ENST00000312970 ZNF441Q8N8Z8 693 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 C17orf47Q8NEP4 570 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 OR7G1Q8NGA0 311 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 OR52B6Q8NGF0 335 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 FBXO27Q8NI29 283 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 TRPC4APQ8TEL6 797 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 ADIPOR1Q96A54 375 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 FRG2BQ96QU4 278 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 SECISBP2Q96T21 854 aaKnown RBP7.47□□□□□ -1.21
TPM3-203ENST00000312970 ANGPTL4Q9BY76 406 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 TSPYL1Q9H0U9 437 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 OR10A5Q9H207 317 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 SLC6A15Q9H2J7 730 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 TEX10Q9NXF1 929 aaPredicted RBP7.47□□□□□ -1.21
TPM3-203ENST00000312970 NINJ2Q9NZG7 142 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 SPRR3Q9UBC9 169 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 MTRF1LQ9UGC7 380 aaKnown RBP7.47□□□□□ -1.21
TPM3-203ENST00000312970 ADAM29Q9UKF5 820 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 IKBKGQ9Y6K9 419 aa7.47□□□□□ -1.21
TPM3-203ENST00000312970 JMJD1CQ15652 2540 aa7.46□□□□□ -1.21
TPM3-203ENST00000312970 FLNAP21333 2647 aaKnown RBP7.46□□□□□ -1.22
TPM3-203ENST00000312970 C15orf38-AP3S2A0A0A6YYH1 394 aa7.46□□□□□ -1.22
TPM3-203ENST00000312970 A0A1W2PS29 197 aa7.46□□□□□ -1.22
TPM3-203ENST00000312970 B2RBV5 119 aa7.46□□□□□ -1.22
TPM3-203ENST00000312970 SYT5O00445 386 aa7.46□□□□□ -1.22
TPM3-203ENST00000312970 CDH16O75309 829 aa7.46□□□□□ -1.22
TPM3-203ENST00000312970 LRATO95237 230 aa7.46□□□□□ -1.22
TPM3-203ENST00000312970 HPNP05981 417 aa7.46□□□□□ -1.22
TPM3-203ENST00000312970 INHBAP08476 426 aa7.46□□□□□ -1.22
TPM3-203ENST00000312970 CT62P0C5K7 136 aa7.46□□□□□ -1.22
TPM3-203ENST00000312970 CPMP14384 443 aa7.46□□□□□ -1.22
TPM3-203ENST00000312970 CD1EP15812 388 aa7.46□□□□□ -1.22
TPM3-203ENST00000312970 NAGAP17050 411 aa7.46□□□□□ -1.22
TPM3-203ENST00000312970 KRT15P19012 456 aa7.46□□□□□ -1.22
TPM3-203ENST00000312970 S1PR1P21453 382 aa7.46□□□□□ -1.22
TPM3-203ENST00000312970 NT5EP21589 574 aa7.46□□□□□ -1.22
TPM3-203ENST00000312970 CNTFP26441 200 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms