RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 FAM83HQ6ZRV2 1179 aaPredicted RBP9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 LGI4Q8N135 537 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 RNF175Q8N4F7 328 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 RPLP0P6Q8NHW5 317 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 MED8Q96G25 268 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 OR5M11Q96RB7 305 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 KCNS3Q9BQ31 491 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 GTPBP2Q9BX10 602 aaKnown RBP9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 DNAJC11Q9NVH1 559 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 RLIMQ9NVW2 624 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 UCKL1Q9NWZ5 548 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 MRPL39Q9NYK5 338 aaKnown RBP9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 TEKT2Q9UIF3 430 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 DIMT1Q9UNQ2 313 aaKnown RBP9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 BOLA1Q9Y3E2 137 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 ZNF451Q9Y4E5 1061 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 V9GYH0 126 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 DMDP11532 3685 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 SLC5A10A0PJK1 596 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 GFYI3L273 518 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 PLD2O14939 933 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 SCAMP2O15127 329 aaKnown RBP9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 SLC16A5O15375 505 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 UGDHO60701 494 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 LILRB5O75023 590 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 NUDT7P0C024 238 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 MPC1LP0DKB6 136 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 LAMP1P11279 417 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 GZMKP49863 264 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 ANGPT1Q15389 498 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 SSX1Q16384 188 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 ARMC4Q5T2S8 1044 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 LIPJQ5W064 366 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 ZNF776Q68DI1 518 aaPredicted RBP9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 PLAG1Q6DJT9 500 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 TMEM92Q6UXU6 159 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 SLC44A2Q8IWA5 706 aaPredicted RBP9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 SAMD14Q8IZD0 417 aaPredicted RBP9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 FAM181AQ8N9Y4 354 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 KCT2Q8NC54 265 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 SPPL2AQ8TCT8 520 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 UTP15Q8TED0 518 aaKnown RBP9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 ASB15Q8WXK1 588 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 NEDD4LQ96PU5 975 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 NIPSNAP1Q9BPW8 284 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 EBPLQ9BY08 206 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 ROGDIQ9GZN7 287 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 CLN6Q9NWW5 311 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 NFKBIL1Q9UBC1 381 aaPredicted RBP9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 CA5BQ9Y2D0 317 aa9.78□□□□□ -0.84
APOBEC3F-201ENST00000308521 CKAP5Q14008 2032 aa9.77□□□□□ -0.84
APOBEC3F-201ENST00000308521 A0A1W2PQU0 124 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 MEIOCA2RUB1 952 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 ARRDC5A6NEK1 342 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 H3BM21 787 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 PRAMEF4O60810 478 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 SCG5P05408 212 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 ASMTP46597 345 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 LIMS1P48059 325 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 HMGA2P52926 109 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 CYP4F2P78329 520 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 SPIBQ01892 262 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 DPTQ07507 201 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 SP140Q13342 867 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 MED22Q15528 200 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 EXOC3L2Q2M3D2 409 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 PRAMEF9Q5VWM5 478 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 PRSS42Q7Z5A4 293 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 AMIGO1Q86WK6 493 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 DEDD2Q8WXF8 326 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 RAB7BQ96AH8 199 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 C11orf24Q96F05 449 aaPredicted RBP9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 ASPNQ9BXN1 380 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 SPATA6Q9NWH7 488 aaPredicted RBP9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 VPS29Q9UBQ0 182 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 ZNF282Q9UDV7 671 aaPredicted RBP9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 SNX8Q9Y5X2 465 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 ZAR1LA6NP61 321 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 AP3D1O14617 1153 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 SEC14L5O43304 696 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 SH3BGRLO75368 114 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 SLC16A8O95907 504 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 ADH1BP00325 375 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 ALPPP05187 535 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 F8A1P23610 371 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 RORCP51449 518 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 CDK3Q00526 305 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 RBBP4Q09028 425 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 NAE1Q13564 534 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 IRF4Q15306 451 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 CPTPQ5TA50 214 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 KIAA1324Q6UXG2 1013 aaKnown RBP9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 TMPRSS11AQ6ZMR5 421 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 PLEKHM3Q6ZWE6 761 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 TRIM69Q86WT6 500 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 GPALPP1Q8IXQ4 340 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 C1orf52Q8N6N3 182 aaKnown RBP9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 OR8K5Q8NH50 307 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 COQ8BQ96D53 544 aa9.77□□□□□ -0.85
APOBEC3F-201ENST00000308521 SIPA1Q96FS4 1042 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms