RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 PCDH8O95206 1070 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 C8orf89P0DMQ9 161 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 M6PRP20645 277 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 IL32P24001 234 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 MRPL28Q13084 256 aaKnown RBP12.73□□□□□ -0.37
CTDP1-202ENST00000299543 FLYWCH1Q4VC44 716 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 CRB2Q5IJ48 1285 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 PLAG1Q6DJT9 500 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 KIAA1324Q6UXG2 1013 aaKnown RBP12.73□□□□□ -0.37
CTDP1-202ENST00000299543 AMER3Q8N944 861 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 ZBTB44Q8NCP5 570 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 ENKURQ8TC29 256 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 FBXW5Q969U6 566 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 OTULINQ96BN8 352 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 MAPKAP1Q9BPZ7 522 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 ZDHHC5Q9C0B5 715 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 TMEM38AQ9H6F2 299 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 EQTNQ9NQ60 294 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 F5P12259 2224 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 H1F0P07305 194 aaKnown RBP12.72□□□□□ -0.37
CTDP1-202ENST00000299543 UGT2B10P36537 528 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 SMSP52788 366 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 FAPQ12884 760 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 ANKRD33Q7Z3H0 272 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 VN1R5Q7Z5H4 357 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 AMZ2Q86W34 360 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 C12orf76Q8N812 135 aaPredicted RBP12.72□□□□□ -0.37
CTDP1-202ENST00000299543 CXorf40BQ96DE9 158 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 TEX10Q9NXF1 929 aaPredicted RBP12.72□□□□□ -0.37
CTDP1-202ENST00000299543 SYNDIG1LA6NDD5 238 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 SHOXO15266 292 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 SLITRK5O94991 958 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 SOD1P00441 154 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 PDGFAP04085 211 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 ADH5P11766 374 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 GABRB1P18505 474 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 C21orf58P58505 322 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 BTN1A1Q13410 526 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 KRT33BQ14525 404 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 SPRED2Q7Z698 418 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 LAS2Q8IYD9 372 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 ADGRF3Q8IZF5 1079 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 GPR32P1Q8NGA4 272 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 OR9Q1Q8NGQ5 310 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 UBE2E3Q969T4 207 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 CRELD1Q96HD1 420 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 SGPP1Q9BX95 441 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.72□□□□□ -0.374e-8■■■■□ 19.8
CTDP1-202ENST00000299543 QRSL1Q9H0R6 528 aaKnown RBP12.72□□□□□ -0.37
CTDP1-202ENST00000299543 MVB12BQ9H7P6 319 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 THSD1Q9NS62 852 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 A0A1W2PQ09 198 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 LRRTM2O43300 516 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 PRNPP04156 253 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 CEBPBP17676 345 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 CTNNB1P35222 781 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 CLCNKAP51800 687 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 MLLT1Q03111 559 aaPredicted RBP12.72□□□□□ -0.37
CTDP1-202ENST00000299543 EEF1A2Q05639 463 aaKnown RBP12.72□□□□□ -0.37
CTDP1-202ENST00000299543 HEPACAMQ14CZ8 416 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 TIMM50Q3ZCQ8 353 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 TCTN3Q6NUS6 607 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 SHFQ7M4L6 423 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 ANKRD53Q8N9V6 530 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 GOT1L1Q8NHS2 421 aaPredicted RBP12.72□□□□□ -0.37
CTDP1-202ENST00000299543 RIPOR3Q96MK2 946 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 TSSK6Q9BXA6 273 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 ANKRA2Q9H9E1 313 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 SLC35C2Q9NQQ7 365 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 ZCCHC3Q9NUD5 404 aaKnown RBP12.72□□□□□ -0.37
CTDP1-202ENST00000299543 REV1Q9UBZ9 1251 aa12.72□□□□□ -0.37
CTDP1-202ENST00000299543 ZMAT5Q9UDW3 170 aaKnown RBP12.72□□□□□ -0.37
CTDP1-202ENST00000299543 TBC1D3BA6NDS4 549 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 MYL12BO14950 172 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 FRS3O43559 492 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 RPS19P39019 145 aaKnown RBP12.71□□□□□ -0.37
CTDP1-202ENST00000299543 AP2S1P53680 142 aaPredicted RBP12.71□□□□□ -0.37
CTDP1-202ENST00000299543 ZNF45Q02386 682 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 RUNX1T1Q06455 604 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 SPHARQ15513 63 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 SSX1Q16384 188 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 ZNF750Q32MQ0 723 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 ZNF367Q7RTV3 350 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 OR4D11Q8NGI4 311 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 GPR151Q8TDV0 419 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 KLHL6Q8WZ60 621 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 AIF1LQ9BQI0 150 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 TRAF4Q9BUZ4 470 aaPredicted RBP12.71□□□□□ -0.37
CTDP1-202ENST00000299543 TRMT61BQ9BVS5 477 aaKnown RBP12.71□□□□□ -0.37
CTDP1-202ENST00000299543 FNDC11Q9BVV2 318 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 BRD7Q9NPI1 651 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 TBX21Q9UL17 535 aa12.71□□□□□ -0.37
CTDP1-202ENST00000299543 ZAR1LA6NP61 321 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 UGT2B17O75795 530 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 CLTBP09497 229 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 PSMA1P25786 263 aaKnown RBP12.71□□□□□ -0.38
CTDP1-202ENST00000299543 TNFSF8P32971 234 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 SSR2P43308 183 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 GSTM5P46439 218 aa12.71□□□□□ -0.38
CTDP1-202ENST00000299543 INPP1P49441 399 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms