RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 MED1Q15648 1581 aaPredicted RBP15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 CHD2O14647 1828 aaKnown RBP15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 A0A1W2PQ09 198 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 HMGB3O15347 200 aaKnown RBP15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 CAPNS1P04632 268 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 NUDT7P0C024 238 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 GP1BBP13224 206 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 AK4P27144 223 aaPredicted RBP15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 HMGCLP35914 325 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 MTNR1AP48039 350 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 CXCR4P61073 352 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 NNATQ16517 81 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 STEAP3Q658P3 488 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 NRARPQ7Z6K4 114 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 SLC6A7Q99884 636 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 KCNN3Q9UGI6 736 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 CDC123O75794 336 aaPredicted RBP15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 DRD5P21918 477 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 CCND3P30281 292 aaPredicted RBP15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 ZMYND11Q15326 602 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 CNTRLQ7Z7A1 2325 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 NRROSQ86YC3 692 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 OR4K5Q8NGD3 323 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 OR52P1PQ8NH57 321 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 PXYLP1Q8TE99 480 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 TMEM19Q96HH6 336 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 ARL5BQ96KC2 179 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 GPR62Q9BZJ7 368 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 SRA1Q9HD15 236 aaKnown RBP15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 POLMQ9NP87 494 aaPredicted RBP15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 PTTG3PQ9NZH4 202 aa15.7■□□□□ 0.1
SH3RF1-201ENST00000284637 A0A0U1RQS6 177 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 A6NL46 340 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 PPP6CO00743 305 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 KEAP1Q14145 624 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 GLT8D1Q68CQ7 371 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 CELF5Q8N6W0 485 aaKnown RBP15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 ORAI3Q9BRQ5 295 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 FANCFQ9NPI8 374 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 PARPBPQ9NWS1 579 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 VAPAQ9P0L0 249 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 DNMT3AQ9Y6K1 912 aaPredicted RBP15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 FEZF1A0PJY2 475 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 CLDN24A6NM45 220 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 CA12O43570 354 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 PRDX3P30048 256 aaKnown RBP15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 ERVK-25P63136 954 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 ZNF551Q7Z340 670 aaPredicted RBP15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 GRASPQ7Z6J2 395 aaPredicted RBP15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 NAGSQ8N159 534 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 MUL1Q969V5 352 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 ELMOD3Q96FG2 381 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 KLRF1Q9NZS2 232 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 MAFFQ9ULX9 164 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 ERVK-19Q9WJR5 959 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 GPX3P22352 226 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 RGS19P49795 217 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 RCAN2Q14206 197 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 SGCBQ16585 318 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 C1orf94Q6P1W5 598 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 WDR20Q8TBZ3 569 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 MOAP1Q96BY2 351 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 MSLNLQ96KJ4 702 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 OR10A4Q9H209 315 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 SLCO3A1Q9UIG8 710 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 LTN1O94822 1766 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 SFTPBP07988 381 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 NDUFV2P19404 249 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 EIF4HQ15056 248 aaKnown RBP15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 TATDN3Q17R31 274 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 DEFB134Q4QY38 66 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 ELP2Q6IA86 826 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 OR6N1Q8NGY5 312 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 ACTR10Q9NZ32 417 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 BOLA1Q9Y3E2 137 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 ACTL7AQ9Y615 435 aa15.69■□□□□ 0.1
SH3RF1-201ENST00000284637 M0R129 80 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 SF3A2Q15428 464 aaKnown RBP15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 FAM189A2Q15884 450 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 COL28A1Q2UY09 1125 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 OR5T2Q8NGG2 359 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 SUN3Q8TAQ9 357 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 ASB4Q9Y574 426 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 KRBOX1C9JBD0 128 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 S1PR1P21453 382 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 TRAM1Q15629 374 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 BAIAP2L2Q6UXY1 529 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 THAP4Q8WY91 577 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 SGCDQ92629 289 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 C11orf84Q9BUA3 381 aaPredicted RBP15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 OR51E2Q9H255 320 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 NT5DC2Q9H857 520 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 SPO11Q9Y5K1 396 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 C2orf78A6NCI8 922 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 MEIS3P2A8K0S8 358 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 EMC8O43402 210 aa15.68■□□□□ 0.1
SH3RF1-201ENST00000284637 RGS9O75916 674 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms