RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 GPR26Q8NDV2 337 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 C1GALT1C1Q96EU7 318 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 MARS2Q96GW9 593 aaKnown RBP8.74□□□□□ -1.01
PDGFC-201ENST00000274071 C2orf88Q9BSF0 95 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 EDEM2Q9BV94 578 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 CACNG6Q9BXT2 260 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 ELOVL4Q9GZR5 314 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 SLC25A32Q9H2D1 315 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 FAM221BA6H8Z2 402 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 GABRR3A8MPY1 467 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 CACNB4O00305 520 aaPredicted RBP8.74□□□□□ -1.01
PDGFC-201ENST00000274071 ARPC5O15511 151 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 NCR1O76036 304 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 F12P00748 615 aaPredicted RBP8.74□□□□□ -1.01
PDGFC-201ENST00000274071 HEXAP06865 529 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 ELK1P19419 428 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 NFKB1P19838 968 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 ITGA3P26006 1051 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 AKR1C2P52895 323 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 CDKN2DP55273 166 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 GABREP78334 506 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 SIM1P81133 766 aaPredicted RBP8.74□□□□□ -1.01
PDGFC-201ENST00000274071 AKR1C1Q04828 323 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 COTL1Q14019 142 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 FAM174BQ3ZCQ3 159 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 MARCH8Q5T0T0 291 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 SWSAP1Q6NVH7 229 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 LYPD4Q6UWN0 246 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 Q6ZTK2 550 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 PIM3Q86V86 326 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 SLC44A3Q8N4M1 653 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 POMGNT2Q8NAT1 580 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 SLAMF9Q96A28 289 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 SLC22A18Q96BI1 424 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 FAM193BQ96PV7 902 aaPredicted RBP8.74□□□□□ -1.01
PDGFC-201ENST00000274071 NIPSNAP1Q9BPW8 284 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 SYNDIG1Q9H7V2 258 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 HEBP1Q9NRV9 189 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 IMP3Q9NV31 184 aaKnown RBP8.74□□□□□ -1.01
PDGFC-201ENST00000274071 GDE1Q9NZC3 331 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 DLGAP4Q9Y2H0 992 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 PLEKHA6Q9Y2H5 1048 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 CXorf65A6NEN9 183 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ZNF879B4DU55 563 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 CASKO14936 926 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 EEF1E1O43324 174 aaKnown RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 WISP3O95389 354 aaPredicted RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 OR8U8P0C7N1 319 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 NPBWR1P48145 328 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ITGA1P56199 1179 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 RAB8AP61006 207 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 SEC61A1P61619 476 aaKnown RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ELAVL2Q12926 359 aaKnown RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 HTR4Q13639 388 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 OR4D1Q15615 310 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 SLC36A2Q495M3 483 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 CDPF1Q6NVV7 123 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 GPR65Q8IYL9 337 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 THEM5Q8N1Q8 247 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ZNF383Q8NA42 475 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 DTD1Q8TEA8 209 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 TCTEX1D2Q8WW35 142 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 GATAD2BQ8WXI9 593 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 SLC25A28Q96A46 364 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 TSPAN17Q96FV3 270 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 POLDIP3Q9BY77 421 aaKnown RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 TGIF2Q9GZN2 237 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 TMPRSS5Q9H3S3 457 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 RNF122Q9H9V4 155 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 TCF7L1Q9HCS4 588 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ENAMQ9NRM1 1142 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ADARB2Q9NS39 739 aaKnown RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 PPP4R1LQ9P1A2 415 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 SNX11Q9Y5W9 270 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 SBF1O95248 1867 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 WDR81Q562E7 1941 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 DOCK5Q9H7D0 1870 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 URADA6NGE7 173 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 AGAP14A8MT82 685 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ADM5C9JUS6 153 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 CACNG3O60359 315 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 PRAMEF2O60811 474 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ANXA9O76027 345 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 SPDEFO95238 335 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 IFNGP01579 166 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ANKRD34CP0C6C1 535 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 UROSP10746 265 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 PEPDP12955 493 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 CD1DP15813 335 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ANXA7P20073 488 aaKnown RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 NFYBP25208 207 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 AKT1P31749 480 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 RAB2AP61019 212 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 PRR5P85299 388 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 CDNFQ49AH0 187 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 MINDY4Q4G0A6 757 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 CRTC2Q53ET0 693 aaPredicted RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 GPRC6AQ5T6X5 926 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ZNF613Q6PF04 617 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 FAM122BQ7Z309 247 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms