RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 HSF2Q03933 536 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 ZNF423Q2M1K9 1284 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 CCSAPQ6IQ19 270 aaPredicted RBP13.01□□□□□ -0.33
NPC1-201ENST00000269228 VRK3Q8IV63 474 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 NLGN4XQ8N0W4 816 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 OR2T33Q8NG76 320 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 SLC6A18Q96N87 628 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 PHF12Q96QT6 1004 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 POLE3Q9NRF9 147 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 TM7SF3Q9NS93 570 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 LAMP5Q9UJQ1 280 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 PTRH2Q9Y3E5 179 aaKnown RBP13.01□□□□□ -0.33
NPC1-201ENST00000269228 C2orf92A0A1B0GVN3 265 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 GABRR3A8MPY1 467 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 LSM1O15116 133 aaKnown RBP13.01□□□□□ -0.33
NPC1-201ENST00000269228 RBMXL2O75526 392 aaKnown RBP13.01□□□□□ -0.33
NPC1-201ENST00000269228 IGLV3-27P01718 113 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 DCNP07585 359 aaKnown RBP13.01□□□□□ -0.33
NPC1-201ENST00000269228 HIST1H1TP22492 207 aaPredicted RBP13.01□□□□□ -0.33
NPC1-201ENST00000269228 PRR22Q8IZ63 422 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 CDRT4Q8N9R6 151 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 OR2L8Q8NGY9 312 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 WDR77Q9BQA1 342 aaPredicted RBP13.01□□□□□ -0.33
NPC1-201ENST00000269228 DSN1Q9H410 356 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 GPX3P22352 226 aa13□□□□□ -0.33
NPC1-201ENST00000269228 FOLR3P41439 243 aa13□□□□□ -0.33
NPC1-201ENST00000269228 GCGRP47871 477 aa13□□□□□ -0.33
NPC1-201ENST00000269228 TOR1AIP2Q8NFQ8 470 aa13□□□□□ -0.33
NPC1-201ENST00000269228 FBXO27Q8NI29 283 aa13□□□□□ -0.33
NPC1-201ENST00000269228 NETO1Q8TDF5 533 aa13□□□□□ -0.33
NPC1-201ENST00000269228 SGTBQ96EQ0 304 aa13□□□□□ -0.33
NPC1-201ENST00000269228 MYEOVQ96EZ4 313 aa13□□□□□ -0.33
NPC1-201ENST00000269228 TMEM80Q96HE8 168 aa13□□□□□ -0.33
NPC1-201ENST00000269228 ANKRA2Q9H9E1 313 aa13□□□□□ -0.33
NPC1-201ENST00000269228 BRWD3Q6RI45 1802 aa13□□□□□ -0.33
NPC1-201ENST00000269228 ADAMTSL1Q8N6G6 1762 aa13□□□□□ -0.33
NPC1-201ENST00000269228 SEC14L5O43304 696 aa13□□□□□ -0.33
NPC1-201ENST00000269228 SEMA3DO95025 777 aa13□□□□□ -0.33
NPC1-201ENST00000269228 APOL3O95236 402 aa13□□□□□ -0.33
NPC1-201ENST00000269228 HMGN2P05204 90 aaKnown RBP13□□□□□ -0.33
NPC1-201ENST00000269228 GPR4P46093 362 aa13□□□□□ -0.33
NPC1-201ENST00000269228 RORCP51449 518 aa13□□□□□ -0.33
NPC1-201ENST00000269228 HK3P52790 923 aa13□□□□□ -0.33
NPC1-201ENST00000269228 PIGGQ5H8A4 983 aa13□□□□□ -0.33
NPC1-201ENST00000269228 MEIOBQ8N635 442 aa13□□□□□ -0.33
NPC1-201ENST00000269228 DENND6BQ8NEG7 585 aa13□□□□□ -0.33
NPC1-201ENST00000269228 OR9A4Q8NGU2 314 aa13□□□□□ -0.33
NPC1-201ENST00000269228 TANKQ92844 425 aa13□□□□□ -0.33
NPC1-201ENST00000269228 ITPAQ9BY32 194 aa13□□□□□ -0.33
NPC1-201ENST00000269228 B3GNT4Q9C0J1 378 aa13□□□□□ -0.33
NPC1-201ENST00000269228 SLC6A16Q9GZN6 736 aa13□□□□□ -0.33
NPC1-201ENST00000269228 MYNNQ9NPC7 610 aa13□□□□□ -0.33
NPC1-201ENST00000269228 ASB6Q9NWX5 421 aa13□□□□□ -0.33
NPC1-201ENST00000269228 BTNL2Q9UIR0 455 aa13□□□□□ -0.33
NPC1-201ENST00000269228 PCDHGA7Q9Y5G6 932 aa13□□□□□ -0.33
NPC1-201ENST00000269228 FKBP7Q9Y680 259 aa13□□□□□ -0.33
NPC1-201ENST00000269228 COL4A5P29400 1685 aa13□□□□□ -0.33
NPC1-201ENST00000269228 E2F3O00716 465 aa13□□□□□ -0.33
NPC1-201ENST00000269228 DHFRP00374 187 aa13□□□□□ -0.33
NPC1-201ENST00000269228 MVKQ03426 396 aa13□□□□□ -0.33
NPC1-201ENST00000269228 CBX3Q13185 183 aa13□□□□□ -0.33
NPC1-201ENST00000269228 CYP4V2Q6ZWL3 525 aaPredicted RBP13□□□□□ -0.33
NPC1-201ENST00000269228 FAM86B1Q8N7N1 296 aa13□□□□□ -0.33
NPC1-201ENST00000269228 SETD6Q8TBK2 473 aa13□□□□□ -0.33
NPC1-201ENST00000269228 FAM174AQ8TBP5 190 aa13□□□□□ -0.33
NPC1-201ENST00000269228 CAPSLQ8WWF8 208 aa13□□□□□ -0.33
NPC1-201ENST00000269228 HS6ST2Q96MM7 605 aa13□□□□□ -0.33
NPC1-201ENST00000269228 C1QTNF1Q9BXJ1 281 aa13□□□□□ -0.33
NPC1-201ENST00000269228 VAPAQ9P0L0 249 aa13□□□□□ -0.33
NPC1-201ENST00000269228 ERVK-19Q9WJR5 959 aa13□□□□□ -0.33
NPC1-201ENST00000269228 H0YGG7 62 aa13□□□□□ -0.33
NPC1-201ENST00000269228 RNASET2O00584 256 aaKnown RBP13□□□□□ -0.33
NPC1-201ENST00000269228 ARF3P61204 181 aaPredicted RBP13□□□□□ -0.33
NPC1-201ENST00000269228 TSPAN5P62079 268 aa13□□□□□ -0.33
NPC1-201ENST00000269228 NADK2Q4G0N4 442 aa13□□□□□ -0.33
NPC1-201ENST00000269228 ALG10BQ5I7T1 473 aa13□□□□□ -0.33
NPC1-201ENST00000269228 CARD17Q5XLA6 110 aa13□□□□□ -0.33
NPC1-201ENST00000269228 PAMR1Q6UXH9 720 aa13□□□□□ -0.33
NPC1-201ENST00000269228 DDX51Q8N8A6 666 aaKnown RBP eCLIP13□□□□□ -0.33
NPC1-201ENST00000269228 OR5T3Q8NGG3 340 aa13□□□□□ -0.33
NPC1-201ENST00000269228 NANSQ9NR45 359 aa13□□□□□ -0.33
NPC1-201ENST00000269228 LRRC42Q9Y546 428 aa13□□□□□ -0.33
NPC1-201ENST00000269228 POLR2AP24928 1970 aaKnown RBP13□□□□□ -0.33
NPC1-201ENST00000269228 A0A1W2PRQ8 180 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 VSTM2BA6NLU5 285 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 A8MVJ9 347 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 SOCS2O14508 198 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 SPARCP09486 303 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 SMAD4Q13485 552 aaKnown RBP12.99□□□□□ -0.33
NPC1-201ENST00000269228 ABHD17BQ5VST6 288 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 ALG1LQ6GMV1 187 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 ADIPOR2Q86V24 386 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 ZNF440Q8IYI8 595 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 OR5D16Q8NGK9 328 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 MBNL1Q9NR56 388 aaKnown RBP12.99□□□□□ -0.33
NPC1-201ENST00000269228 HPF1Q9NWY4 346 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 A0A1W2PQ72 361 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 FABP12A6NFH5 140 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 TAF4O00268 1085 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 PROM1O43490 865 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms