RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 SERPINA12Q8IW75 414 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 OR51A7Q8NH64 312 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 ANGPTL6Q8NI99 470 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 WDR48Q8TAF3 677 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 GNPDA2Q8TDQ7 276 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 GRHL3Q8TE85 626 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 GIMAP1Q8WWP7 306 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 ST8SIA4Q92187 359 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 OR2AG1Q9H205 316 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 CKLFQ9UBR5 152 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 BTNL2Q9UIR0 455 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 FARSAQ9Y285 508 aaKnown RBP14.34□□□□□ -0.11
CASC3-201ENST00000264645 OR10H2O60403 315 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 CSF3P09919 207 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 ZNF14P17017 642 aaPredicted RBP14.34□□□□□ -0.11
CASC3-201ENST00000264645 HTR2AP28223 471 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 ADH7P40394 386 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 RGRP47804 291 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 CRYZQ08257 329 aaKnown RBP14.34□□□□□ -0.11
CASC3-201ENST00000264645 CTSL3PQ5NE16 218 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 PRAMEF14Q5SWL7 426 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 CLVS2Q5SYC1 327 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 PRAMEF13Q5VWM6 474 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 SLC25A24Q6NUK1 477 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 PLBD1Q6P4A8 553 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 Q6ZVL8 140 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 SPRYD4Q8WW59 207 aaPredicted RBP14.34□□□□□ -0.11
CASC3-201ENST00000264645 C11orf84Q9BUA3 381 aaPredicted RBP14.34□□□□□ -0.11
CASC3-201ENST00000264645 ALOXE3Q9BYJ1 711 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 CFAP20Q9Y6A4 193 aaKnown RBP14.34□□□□□ -0.11
CASC3-201ENST00000264645 HYKKA2RU49 373 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 ELOA3DA6NLF2 546 aaPredicted RBP14.34□□□□□ -0.11
CASC3-201ENST00000264645 K7ERQ8 282 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 TOR1AO14656 332 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 PIP5K1CO60331 668 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 GMDSO60547 372 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 MMP20O60882 483 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 FARS2O95363 451 aaKnown RBP14.34□□□□□ -0.11
CASC3-201ENST00000264645 EPCAMP16422 314 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 GIPRP48546 466 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 HOXC5Q00444 222 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 MGAT3Q09327 533 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 SEC23BQ15437 767 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 ZNHIT3Q15649 155 aaPredicted RBP14.34□□□□□ -0.11
CASC3-201ENST00000264645 ELOA3BQ3SY89 546 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 KCTD9Q7L273 389 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 ZSCAN1Q8NBB4 408 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 PCSK9Q8NBP7 692 aaKnown RBP14.34□□□□□ -0.11
CASC3-201ENST00000264645 ELOA3Q8NG57 546 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 OR4F15Q8NGB8 312 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 OR2AP1Q8NGE2 309 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 FAM46AQ96IP4 442 aaKnown RBP14.34□□□□□ -0.11
CASC3-201ENST00000264645 NDUFAF4Q9P032 175 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 SCP2D1Q9UJQ7 156 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 TMEM5Q9Y2B1 443 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 CIB4A0PJX0 185 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 ASPDHA6ND91 283 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 F8W036 122 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 KRT33AO76009 404 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 PRH1P02810 166 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 HLA-DMAP28067 261 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 NUDT1P36639 197 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 MAPK9P45984 424 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 ARHGDIBP52566 201 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 BLOC1S1P78537 153 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 E2F1Q01094 437 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 MC2RQ01718 297 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 SSX6Q7RTT6 188 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 COMMD6Q7Z4G1 85 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 BEST3Q8N1M1 668 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 TMEM185AQ8NFB2 350 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 RNF31Q96EP0 1072 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 MFFQ9GZY8 342 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 ABT1Q9ULW3 272 aaKnown RBP14.34□□□□□ -0.11
CASC3-201ENST00000264645 RCBTB2O95199 551 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 GTF2F2P13984 249 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 PCMT1P22061 227 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 KIR2DL3P43628 341 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 AFF1P51825 1210 aaKnown RBP14.33□□□□□ -0.12
CASC3-201ENST00000264645 TAS2R43P59537 309 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 RAB5BP61020 215 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 METTL11BQ5VVY1 283 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 FAM46CQ5VWP2 391 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 LYPD4Q6UWN0 246 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 RPTNQ6XPR3 784 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 CPOQ8IVL8 374 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 TMEM145Q8NBT3 493 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 CNOT9Q92600 299 aaKnown RBP14.33□□□□□ -0.12
CASC3-201ENST00000264645 RELTQ969Z4 430 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 LGR4Q9BXB1 951 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 ELL3Q9HB65 397 aaPredicted RBP14.33□□□□□ -0.12
CASC3-201ENST00000264645 TAC3Q9UHF0 121 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 TRBV4-1A0A0J9YWV2 114 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 METTL21EPA6NDL7 271 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 KRBOX1C9JBD0 128 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 M0R082 166 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 NAA10P41227 235 aaPredicted RBP14.33□□□□□ -0.12
CASC3-201ENST00000264645 MAP2K5Q13163 448 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 UPP1Q16831 310 aa14.33□□□□□ -0.12
CASC3-201ENST00000264645 POMZP3Q6PJE2 187 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms