RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 FAM209AQ5JX71 171 aa8.7□□□□□ -1.02
RPA1-201ENST00000254719 SNAP47Q5SQN1 464 aa8.7□□□□□ -1.02
RPA1-201ENST00000254719 PIP5KL1Q5T9C9 394 aa8.7□□□□□ -1.02
RPA1-201ENST00000254719 GPR153Q6NV75 609 aa8.7□□□□□ -1.02
RPA1-201ENST00000254719 PEX5LQ8IYB4 626 aa8.7□□□□□ -1.02
RPA1-201ENST00000254719 OR56A1Q8NGH5 318 aa8.7□□□□□ -1.02
RPA1-201ENST00000254719 EXOSC8Q96B26 276 aaKnown RBP8.7□□□□□ -1.02
RPA1-201ENST00000254719 HRASLS5Q96KN8 279 aa8.7□□□□□ -1.02
RPA1-201ENST00000254719 PSD2Q9BQI7 771 aa8.7□□□□□ -1.02
RPA1-201ENST00000254719 CXorf36Q9H7Y0 433 aa8.7□□□□□ -1.02
RPA1-201ENST00000254719 TAS2R9Q9NYW1 312 aa8.7□□□□□ -1.02
RPA1-201ENST00000254719 FTSJ1Q9UET6 329 aa8.7□□□□□ -1.02
RPA1-201ENST00000254719 TRBC2A0A5B9 178 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 HEPACAM2A8MVW5 462 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 EML2O95834 649 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 LCKP06239 509 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 TGM1P22735 817 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 PSMB5P28074 263 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 BSGP35613 385 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 MLLT3P42568 568 aaPredicted RBP8.69□□□□□ -1.02
RPA1-201ENST00000254719 OR1E2P47887 323 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 KEAP1Q14145 624 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 DHCR24Q15392 516 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 COLEC12Q5KU26 742 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 ZNF793Q6ZN11 406 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 RFPL4BQ6ZWI9 263 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 RAB43Q86YS6 212 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 CELF2-AS1Q8N7Q2 184 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 SH3YL1Q96HL8 342 aaPredicted RBP8.69□□□□□ -1.02
RPA1-201ENST00000254719 TAPBPLQ9BX59 468 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 UCK2Q9BZX2 261 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 LMAN2LQ9H0V9 348 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 DCSTAMPQ9H295 470 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 TAS2R7Q9NYW3 318 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 MRTO4Q9UKD2 239 aaKnown RBP8.69□□□□□ -1.02
RPA1-201ENST00000254719 PCDH17O14917 1159 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 LAMP2P13473 410 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 CTSEP14091 401 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 CHMP24386 653 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 FBXW4P57775 412 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 ZNF45Q02386 682 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 RPA4Q13156 261 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 MLIPQ5VWP3 458 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 HLA-DQA1Q5Y7H0 255 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 COMMD6Q7Z4G1 85 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 GRASPQ7Z6J2 395 aaPredicted RBP8.69□□□□□ -1.02
RPA1-201ENST00000254719 FAM46DQ8NEK8 389 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 FLCNQ8NFG4 579 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 ING5Q8WYH8 240 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 TFGQ92734 400 aaPredicted RBP8.69□□□□□ -1.02
RPA1-201ENST00000254719 TP53INP1Q96A56 240 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 NACC2Q96BF6 587 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 DEPDC7Q96QD5 511 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 TRPV5Q9NQA5 729 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 MSRAQ9UJ68 235 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 PLAGL1Q9UM63 463 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 ZFR2Q9UPR6 939 aaKnown RBP8.69□□□□□ -1.02
RPA1-201ENST00000254719 SMIM30A4D0T7 59 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 CAPN5O15484 640 aaPredicted RBP8.69□□□□□ -1.02
RPA1-201ENST00000254719 OR10H2O60403 315 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 ATXN8OSP0DMR3 200 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 PRG2P13727 222 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 TNNI3P19429 210 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 S100A1P23297 94 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 ZNF404Q494X3 552 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 CEP78Q5JTW2 689 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 ZNF367Q7RTV3 350 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 DGLUCYQ7Z3D6 616 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 SCAIQ8N9R8 606 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 CHPT1Q8WUD6 406 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 ITPKCQ96DU7 683 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 C1GALT1C1Q96EU7 318 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 PITHD1Q9GZP4 211 aaPredicted RBP8.69□□□□□ -1.02
RPA1-201ENST00000254719 DMRT3Q9NQL9 472 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 MBNL1Q9NR56 388 aaKnown RBP8.69□□□□□ -1.02
RPA1-201ENST00000254719 ZCCHC3Q9NUD5 404 aaKnown RBP8.69□□□□□ -1.02
RPA1-201ENST00000254719 KNL1Q8NG31 2342 aa8.69□□□□□ -1.02
RPA1-201ENST00000254719 SH3D21A4FU49 640 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 TMPRSS11DO60235 418 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 CHRM5P08912 532 aaPredicted RBP8.68□□□□□ -1.02
RPA1-201ENST00000254719 RORCP51449 518 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 SMSP52788 366 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 PLET1Q6UQ28 207 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 C11orf74Q86VG3 221 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 AVL9Q8NBF6 648 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 ZNF485Q8NCK3 441 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 SUN3Q8TAQ9 357 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 CREB3L4Q8TEY5 395 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 CHCHD6Q9BRQ6 235 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 TTYH2Q9BSA4 534 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 CUEDC1Q9NWM3 386 aaPredicted RBP8.68□□□□□ -1.02
RPA1-201ENST00000254719 C14orf119Q9NWQ9 140 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 NDOR1Q9UHB4 597 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 LINC01553A4QN01 128 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 TLR4O00206 839 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 HOXC11O43248 304 aaPredicted RBP8.68□□□□□ -1.02
RPA1-201ENST00000254719 PRKRAO75569 313 aaKnown RBP8.68□□□□□ -1.02
RPA1-201ENST00000254719 BMP4P12644 408 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 CBLP22681 906 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 BMPR1AP36894 532 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms