RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 HNRNPCL2B2RXH8 293 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 HNRNPCL3B7ZW38 293 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 NME6O75414 186 aaPredicted RBP17.37■□□□□ 0.37
HOXC11-201ENST00000243082 GASTP01350 101 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 CSF2P04141 144 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 HNRNPCL4P0DMR1 293 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 TLX1P31314 330 aaPredicted RBP17.37■□□□□ 0.37
HOXC11-201ENST00000243082 SLC35A2P78381 396 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 FOXD4Q12950 439 aaPredicted RBP17.37■□□□□ 0.37
HOXC11-201ENST00000243082 GNA13Q14344 377 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 HLA-CQ95604 372 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 BTBD2Q9BX70 525 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 NAA50Q9GZZ1 169 aaKnown RBP17.37■□□□□ 0.37
HOXC11-201ENST00000243082 POMT2Q9UKY4 750 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 RNF6Q9Y252 685 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 MRPS17Q9Y2R5 130 aaKnown RBP17.37■□□□□ 0.37
HOXC11-201ENST00000243082 ASNA1O43681 348 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 POU2F1P14859 743 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 ST6GAL1P15907 406 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 SOX18P35713 384 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 MAZP56270 477 aaKnown RBP17.36■□□□□ 0.37
HOXC11-201ENST00000243082 GPAT3Q53EU6 434 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 C6orf132Q5T0Z8 1188 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 PRAMEF8Q5VWM4 474 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 PRAMEF7Q5VXH5 474 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 CWF19L1Q69YN2 538 aaKnown RBP17.36■□□□□ 0.37
HOXC11-201ENST00000243082 PTCRAQ6ISU1 281 aaPredicted RBP17.36■□□□□ 0.37
HOXC11-201ENST00000243082 FAM111BQ6SJ93 734 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 DEF8Q6ZN54 512 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 USP53Q70EK8 1073 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 HMGN2P46Q86SG4 172 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 SAMD14Q8IZD0 417 aaPredicted RBP17.36■□□□□ 0.37
HOXC11-201ENST00000243082 AQP11Q8NBQ7 271 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 COL26A1Q96A83 441 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 SPATA5L1Q9BVQ7 753 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 ZNF556Q9HAH1 456 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 FAM60AQ9NP50 221 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 ERVK-18Q9QC07 812 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 TPRKBQ9Y3C4 175 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 SNX5Q9Y5X3 404 aa17.36■□□□□ 0.37
HOXC11-201ENST00000243082 FAM227AF5H4B4 570 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 M0R3H8 397 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 MAOBP27338 520 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 CD38P28907 300 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 KRT20P35900 424 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 VSX2P58304 361 aaPredicted RBP17.35■□□□□ 0.37
HOXC11-201ENST00000243082 TUBA3CQ13748 450 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 SEC23BQ15437 767 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 TAGAPQ8N103 731 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 PARP8Q8N3A8 854 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 ZNF655Q8N720 491 aaPredicted RBP17.35■□□□□ 0.37
HOXC11-201ENST00000243082 CSNK1A1LQ8N752 337 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 GTPBP3Q969Y2 492 aaKnown RBP17.35■□□□□ 0.37
HOXC11-201ENST00000243082 RHNO1Q9BSD3 238 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 ACTRT3Q9BYD9 372 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 SEMA6CQ9H3T2 930 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 IL21RQ9HBE5 538 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 PCDHGB1Q9Y5G3 927 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 SOX1O00570 391 aaPredicted RBP17.35■□□□□ 0.37
HOXC11-201ENST00000243082 LGI1O95970 557 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 NME1P15531 152 aaKnown RBP17.35■□□□□ 0.37
HOXC11-201ENST00000243082 ELAVL4P26378 380 aaKnown RBP17.35■□□□□ 0.37
HOXC11-201ENST00000243082 GSSP48637 474 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 STARD6P59095 220 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 NPTX1Q15818 432 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.35■□□□□ 0.37
HOXC11-201ENST00000243082 SIMC1Q8NDZ2 872 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 OR5T3Q8NGG3 340 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 MUL1Q969V5 352 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 SLC35A4Q96G79 324 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 FUZQ9BT04 418 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 SLC38A1Q9H2H9 487 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 STARD5Q9NSY2 213 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 SCN3BQ9NY72 215 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 A4GNTQ9UNA3 340 aa17.35■□□□□ 0.37
HOXC11-201ENST00000243082 H3BMQ9 156 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 CYR61O00622 381 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 GALR3O60755 368 aaPredicted RBP17.34■□□□□ 0.37
HOXC11-201ENST00000243082 H1F0P07305 194 aaKnown RBP17.34■□□□□ 0.37
HOXC11-201ENST00000243082 CTSBP07858 339 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 CPMP14384 443 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 IL9P15248 144 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 ITIH1P19827 911 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 EMX1Q04741 257 aaPredicted RBP17.34■□□□□ 0.37
HOXC11-201ENST00000243082 MFSD12Q6NUT3 480 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 ARMC6Q6NXE6 501 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 KLHL17Q6TDP4 642 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 WDR53Q7Z5U6 358 aaPredicted RBP17.34■□□□□ 0.37
HOXC11-201ENST00000243082 OR2L13Q8N349 312 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 TMEM52Q8NDY8 209 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 COG8Q96MW5 612 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 TRNT1Q96Q11 434 aaKnown RBP17.34■□□□□ 0.37
HOXC11-201ENST00000243082 CCDC90BQ9GZT6 254 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 QRSL1Q9H0R6 528 aaKnown RBP17.34■□□□□ 0.37
HOXC11-201ENST00000243082 GIN1Q9NXP7 522 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 LIPT1Q9Y234 373 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 PCDHGA10Q9Y5H3 936 aa17.34■□□□□ 0.37
HOXC11-201ENST00000243082 DSPPQ9NZW4 1301 aa17.33■□□□□ 0.37
HOXC11-201ENST00000243082 ATE1O95260 518 aa17.33■□□□□ 0.37
HOXC11-201ENST00000243082 PORP16435 677 aaPredicted RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms