RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 SUPT7LO94864 414 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 RPS17P08708 135 aaKnown RBP12.66□□□□□ -0.38
DDX39A-201ENST00000242776 EPB42P16452 691 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 GDF1P27539 372 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 SERPINB5P36952 375 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 ZNF136P52737 540 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 WDR4P57081 412 aaKnown RBP12.66□□□□□ -0.38
DDX39A-201ENST00000242776 PDK4Q16654 411 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 HYAL4Q2M3T9 481 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 Q5PR19 223 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 P3H2Q8IVL5 708 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 OR4N5Q8IXE1 308 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 CCNYL1Q8N7R7 359 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 SNX31Q8N9S9 440 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 OR5L2Q8NGL0 311 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 NEIL3Q8TAT5 605 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 RAB3IL1Q8TBN0 382 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 QRFPRQ96P65 431 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 TRIB1Q96RU8 372 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 NPLQ9BXD5 320 aaPredicted RBP12.66□□□□□ -0.38
DDX39A-201ENST00000242776 GPRC5BQ9NZH0 403 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 BOKQ9UMX3 212 aaPredicted RBP12.66□□□□□ -0.38
DDX39A-201ENST00000242776 KCNE2Q9Y6J6 123 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 MED12Q93074 2177 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 A0A1W2PPR1 153 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 WDR91A4D1P6 747 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 LRRC3CA6NJW4 275 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 CYR61O00622 381 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 CLGNO14967 610 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 CTNSO60931 367 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 SIX3O95343 332 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-201ENST00000242776 IL2RAP01589 272 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 C1GALT1C1LP0DN25 315 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 DUSP8Q13202 625 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 GTF2H2Q13888 395 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 CHI3L2Q15782 390 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 FBXO48Q5FWF7 155 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 ATG16L1Q676U5 607 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 GTF2H2CQ6P1K8 395 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 TRIM40Q6P9F5 258 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 POMZP3Q6PJE2 187 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 OR10G3Q8NGC4 313 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 ZNF721Q8TF20 911 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 ESAMQ96AP7 390 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 PPWD1Q96BP3 646 aaKnown RBP12.65□□□□□ -0.38
DDX39A-201ENST00000242776 F2RL3Q96RI0 385 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 GAL3ST4Q96RP7 486 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 SERINC2Q96SA4 455 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 TRMOQ9BU70 441 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 REXO4Q9GZR2 422 aaKnown RBP12.65□□□□□ -0.38
DDX39A-201ENST00000242776 ZFP64Q9NPA5 681 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 COPS7AQ9UBW8 275 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 VTI1BQ9UEU0 232 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 PCTPQ9UKL6 214 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 DAPP1Q9UN19 280 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 SLC6A5Q9Y345 797 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 ARID1AO14497 2285 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 A0A088AWK7 358 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 ANKDD1BA6NHY2 528 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 INAFM1C9JVW0 142 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 HRKO00198 91 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 NPHS1O60500 1241 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 SNUPNO95149 360 aaKnown RBP12.65□□□□□ -0.38
DDX39A-201ENST00000242776 EPPINO95925 133 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 SERPINE1P05121 402 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 ZNF10P21506 573 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-201ENST00000242776 GRK2P25098 689 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 CEACAM8P31997 349 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-201ENST00000242776 NAGLUP54802 743 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 MTTPP55157 894 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 TOMM20Q15388 145 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 ZNF791Q3KP31 576 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-201ENST00000242776 PIGGQ5H8A4 983 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 TMIGD1Q6UXZ0 262 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 FRMD7Q6ZUT3 714 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 KIF18BQ86Y91 864 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 C9orf40Q8IXQ3 194 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 TEX9Q8N6V9 391 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 SLC22A8Q8TCC7 542 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 ZNF483Q8TF39 744 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-201ENST00000242776 ATP6V1E2Q96A05 226 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 Q96MF0 132 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 MAPKAP1Q9BPZ7 522 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 PROK2Q9HC23 129 aa12.65□□□□□ -0.38
DDX39A-201ENST00000242776 BEX4Q9NWD9 120 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-201ENST00000242776 TMEM114B3SHH9 223 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 RTCAO00442 366 aaKnown RBP12.64□□□□□ -0.39
DDX39A-201ENST00000242776 HRGP04196 525 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 GNAZP19086 355 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 BGNP21810 368 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 ARL1P40616 181 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-201ENST00000242776 CCNG1P51959 295 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 CLCQ05315 142 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 RCN2Q14257 317 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 FBXL19-AS1Q494R0 122 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 UNC50Q53HI1 259 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 SHEQ5VZ18 495 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 PLXDC2Q6UX71 529 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 TMEM64Q6YI46 380 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 DGAT2L6Q6ZPD8 337 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms