RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ISM1B1AKI9 464 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 ZW10O43264 779 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 EML2O95834 649 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 STATHP02808 62 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 OCM2P0CE71 109 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 OCMP0CE72 109 aaPredicted RBP15.23■□□□□ 0.03
UBE3D-201ENST00000237186 PRKAG1P54619 331 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 RAB8AP61006 207 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 ADAM15Q13444 863 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 NFATC4Q14934 902 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 NCF4Q15080 339 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 OCLNQ16625 522 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 ZNF750Q32MQ0 723 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 TJAP1Q5JTD0 557 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 C1orf94Q6P1W5 598 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 PODNL1Q6PEZ8 512 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 NRROSQ86YC3 692 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 OR4E2Q8NGC2 313 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 OR6T1Q8NGN1 323 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 GAL3ST3Q96A11 431 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 ELP4Q96EB1 424 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 SIPA1Q96FS4 1042 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 ABHD8Q96I13 439 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 PRRC1Q96M27 445 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 MROQ9BYG7 248 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 NXF2Q9GZY0 626 aaKnown RBP15.23■□□□□ 0.03
UBE3D-201ENST00000237186 C3orf14Q9HBI5 128 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 CLEC1BQ9P126 229 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 ZNF624Q9P2J8 865 aaPredicted RBP15.23■□□□□ 0.03
UBE3D-201ENST00000237186 NCKAP1Q9Y2A7 1128 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 IFT52Q9Y366 437 aa15.23■□□□□ 0.03
UBE3D-201ENST00000237186 MYO9BQ13459 2157 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 METTL15A6NJ78 407 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 KPNA4O00629 521 aaPredicted RBP15.22■□□□□ 0.03
UBE3D-201ENST00000237186 ENTPD6O75354 484 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 ADRA2AP08913 450 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 SMIM10L1P0DMW3 83 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 BMP4P12644 408 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 CTHP32929 405 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 FEN1P39748 380 aaKnown RBP15.22■□□□□ 0.03
UBE3D-201ENST00000237186 RANBP1P43487 201 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 SFSWAPQ12872 951 aaKnown RBP15.22■□□□□ 0.03
UBE3D-201ENST00000237186 TARDBPQ13148 414 aaKnown RBP eCLIP15.22■□□□□ 0.038e-6■□□□□ 10.7
UBE3D-201ENST00000237186 OXA1LQ15070 435 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 ENTPD8Q5MY95 495 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 ENPP7Q6UWV6 458 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 BTLAQ7Z6A9 289 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 ZER1Q7Z7L7 766 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 ZNF554Q86TJ5 538 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 MORN4Q8NDC4 146 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 FLVCR1-AS1Q8TAF5 88 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 TM4SF19Q96DZ7 209 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 SMIM10Q96HG1 83 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 C10orf90Q96M02 699 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 WDR92Q96MX6 357 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 TRNT1Q96Q11 434 aaKnown RBP15.22■□□□□ 0.03
UBE3D-201ENST00000237186 FNDC11Q9BVV2 318 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 PRDM9Q9NQV7 894 aa15.22■□□□□ 0.03
UBE3D-201ENST00000237186 PLXND1Q9Y4D7 1925 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 A6NCN8 305 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 M0R3H8 397 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 BTN3A3O00478 584 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 TNFRSF10CO14798 259 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 TNFSF14O43557 240 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 NME6O75414 186 aaPredicted RBP15.21■□□□□ 0.03
UBE3D-201ENST00000237186 EGFP01133 1207 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 GRK5P34947 590 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 RHAGQ02094 409 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 RGS1Q08116 209 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 KIR2DS3Q14952 304 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 TMEM107Q6UX40 140 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 CASP12Q6UXS9 341 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 TRIM69Q86WT6 500 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 NUP43Q8NFH3 380 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 MCFD2Q8NI22 146 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 C16orf58Q96GQ5 468 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 BMFQ96LC9 184 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 RIPOR3Q96MK2 946 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 ROGDIQ9GZN7 287 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 ZBTB20Q9HC78 741 aaPredicted RBP15.21■□□□□ 0.03
UBE3D-201ENST00000237186 CALML5Q9NZT1 146 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 KLHL20Q9Y2M5 609 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 ZNF780BQ9Y6R6 833 aa15.21■□□□□ 0.03
UBE3D-201ENST00000237186 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 KLF8O95600 359 aaPredicted RBP15.2■□□□□ 0.02
UBE3D-201ENST00000237186 IGFBP1P08833 259 aaPredicted RBP15.2■□□□□ 0.02
UBE3D-201ENST00000237186 TGFBR1P36897 503 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 CLDN2P57739 230 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 BTN3A2P78410 334 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 EFNB1P98172 346 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 INAQ16352 499 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 ZNF404Q494X3 552 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 FBXO42Q6P3S6 717 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 TUBA3EQ6PEY2 450 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 ASPGQ86U10 573 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 SAMD14Q8IZD0 417 aaPredicted RBP15.2■□□□□ 0.02
UBE3D-201ENST00000237186 FAM26EQ8N5C1 309 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 MINDY2Q8NBR6 621 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 KBTBD8Q8NFY9 601 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 OR4K5Q8NGD3 323 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms