RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 SIM1P81133 766 aaPredicted RBP27.89■■■□□ 2.05
PABPN1-201ENST00000216727 IQCHQ86VS3 1027 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 CSNK1A1LQ8N752 337 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 AVL9Q8NBF6 648 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 AQP11Q8NBQ7 271 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 APH1BQ8WW43 257 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 HLA-CQ95604 372 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 MUL1Q969V5 352 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 TRNT1Q96Q11 434 aaKnown RBP27.89■■■□□ 2.05
PABPN1-201ENST00000216727 CCNB1IP1Q9NPC3 277 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 CALML5Q9NZT1 146 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 RNF6Q9Y252 685 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 SLC9A8Q9Y2E8 581 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 KCNE3Q9Y6H6 103 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 SPACA6W5XKT8 324 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 TRBV4-1A0A0J9YWV2 114 aa27.88■■■□□ 2.05
PABPN1-201ENST00000216727 WNT1P04628 370 aa27.88■■■□□ 2.05
PABPN1-201ENST00000216727 H1F0P07305 194 aaKnown RBP27.88■■■□□ 2.05
PABPN1-201ENST00000216727 NME1P15531 152 aaKnown RBP27.88■■■□□ 2.05
PABPN1-201ENST00000216727 CD38P28907 300 aa27.88■■■□□ 2.05
PABPN1-201ENST00000216727 ELOCQ15369 112 aa27.88■■■□□ 2.05
PABPN1-201ENST00000216727 GPAT3Q53EU6 434 aa27.88■■■□□ 2.05
PABPN1-201ENST00000216727 DEF8Q6ZN54 512 aa27.88■■■□□ 2.05
PABPN1-201ENST00000216727 ZNF438Q7Z4V0 828 aa27.88■■■□□ 2.05
PABPN1-201ENST00000216727 RBM45Q8IUH3 476 aaKnown RBP27.88■■■□□ 2.05
PABPN1-201ENST00000216727 CADM4Q8NFZ8 388 aa27.88■■■□□ 2.05
PABPN1-201ENST00000216727 OR7G2Q8NG99 324 aa27.88■■■□□ 2.05
PABPN1-201ENST00000216727 VANGL1Q8TAA9 524 aaPredicted RBP27.88■■■□□ 2.05
PABPN1-201ENST00000216727 UBE2FQ969M7 185 aa27.88■■■□□ 2.05
PABPN1-201ENST00000216727 MS4A4EQ96PG1 132 aa27.88■■■□□ 2.05
PABPN1-201ENST00000216727 RASSF1Q9NS23 344 aa27.88■■■□□ 2.05
PABPN1-201ENST00000216727 TRIOO75962 3097 aa27.88■■■□□ 2.05
PABPN1-201ENST00000216727 KRBA1A5PL33 1030 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 DUXAA6NLW8 204 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 LGI1O95970 557 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 ELAVL4P26378 380 aaKnown RBP27.87■■■□□ 2.05
PABPN1-201ENST00000216727 TMBIM6P55061 237 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 STARD6P59095 220 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 CHCHD2P9Q5T1J5 151 aaPredicted RBP27.87■■■□□ 2.05
PABPN1-201ENST00000216727 Q6ZPB1 254 aaPredicted RBP27.87■■■□□ 2.05
PABPN1-201ENST00000216727 LACC1Q8IV20 430 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 OR2L13Q8N349 312 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 WFDC6Q9BQY6 131 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 PINK1Q9BXM7 581 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 LIN28AQ9H9Z2 209 aaKnown RBP27.87■■■□□ 2.05
PABPN1-201ENST00000216727 EQTNQ9NQ60 294 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 GIN1Q9NXP7 522 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 DSPPQ9NZW4 1301 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 TRIM64BA6NI03 449 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 FAM170BA6NMN3 283 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 H3BMQ9 156 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 GALR3O60755 368 aaPredicted RBP27.87■■■□□ 2.05
PABPN1-201ENST00000216727 ADAP00813 363 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 GASTP01350 101 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 CPMP14384 443 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 TYRP1P17643 537 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 KRT20P35900 424 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 TEKQ02763 1124 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 DYNC1I2Q13409 638 aaKnown RBP27.87■■■□□ 2.05
PABPN1-201ENST00000216727 NPTX1Q15818 432 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 DCST1Q5T197 706 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 ATAD3BQ5T9A4 648 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 COMTD1Q86VU5 262 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 IPCEF1Q8WWN9 437 aaPredicted RBP27.87■■■□□ 2.05
PABPN1-201ENST00000216727 COG8Q96MW5 612 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 ANKRA2Q9H9E1 313 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 TMEM74BQ9NUR3 256 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 PTGFRNQ9P2B2 879 aa27.87■■■□□ 2.05
PABPN1-201ENST00000216727 TDRD6O60522 2096 aaKnown RBP27.86■■■□□ 2.05
PABPN1-201ENST00000216727 FAAHO00519 579 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 FASLGP48023 281 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 OLR1P78380 273 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 SMN1Q16637 294 aaKnown RBP27.86■■■□□ 2.05
PABPN1-201ENST00000216727 LEXMQ3ZCV2 418 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 PTCRAQ6ISU1 281 aaPredicted RBP27.86■■■□□ 2.05
PABPN1-201ENST00000216727 MFSD12Q6NUT3 480 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 FAM92BQ6ZTR7 304 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 OLIG3Q7RTU3 272 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 GJD3Q8N144 294 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 DEPDC4Q8N2C3 294 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 RHOXF1Q8NHV9 184 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 GTPBP3Q969Y2 492 aaKnown RBP27.86■■■□□ 2.05
PABPN1-201ENST00000216727 FUZQ9BT04 418 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 SLC38A1Q9H2H9 487 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 IL21RQ9HBE5 538 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 ERVK-18Q9QC07 812 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 A4GNTQ9UNA3 340 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 KNL1Q8NG31 2342 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 DNAH14Q0VDD8 3507 aa27.86■■■□□ 2.05
PABPN1-201ENST00000216727 A0A1W2PPC1 479 aa27.85■■■□□ 2.05
PABPN1-201ENST00000216727 EPPINO95925 133 aa27.85■■■□□ 2.05
PABPN1-201ENST00000216727 AGR2O95994 175 aa27.85■■■□□ 2.05
PABPN1-201ENST00000216727 PORP16435 677 aaPredicted RBP27.85■■■□□ 2.05
PABPN1-201ENST00000216727 EMX1Q04741 257 aaPredicted RBP27.85■■■□□ 2.05
PABPN1-201ENST00000216727 FGD3Q5JSP0 725 aa27.85■■■□□ 2.05
PABPN1-201ENST00000216727 MLIPQ5VWP3 458 aa27.85■■■□□ 2.05
PABPN1-201ENST00000216727 HEPHL1Q6MZM0 1159 aa27.85■■■□□ 2.05
PABPN1-201ENST00000216727 FAM111BQ6SJ93 734 aa27.85■■■□□ 2.05
PABPN1-201ENST00000216727 PRSS41Q7RTY9 318 aa27.85■■■□□ 2.05
PABPN1-201ENST00000216727 ZNF540Q8NDQ6 660 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms