RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Stx4P70452 298 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 FancbQ5XJY6 703 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Itih2Q61703 946 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gja6Q6S5G4 283 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Smpd4Q6ZPR5 823 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Fam185aQ7TPD2 378 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Paqr7Q80ZE4 345 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Adprhl1Q8BGK2 353 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tusc3Q8BTV1 347 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Olfr1446Q8VFX4 308 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Vsx1Q91V10 363 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Pcdhb10Q91VE5 797 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Usp11Q99K46 921 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 NanpQ9CPT3 248 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 NenfQ9CQ45 171 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Xrcc2Q9CX47 278 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tspan13Q9D8C2 204 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Lrrc34Q9DAM1 415 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Barx1Q9ER42 254 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ralgps2Q9ERD6 590 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 PlekQ9JHK5 350 aaKnown RBP8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Nrip3Q9JJR9 240 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Slc5a3Q9JKZ2 718 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Suclg1Q9WUM5 346 aaKnown RBP8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 DexiQ9WUQ7 95 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Fer1l4A3KGK3 1992 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Myo16Q5DU14 1919 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 9230102O04RikA2ASX7 82 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Rsrc2A2RTL5 376 aaKnown RBP8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm6904E9PVF1 202 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Vmn1r158G3UY92 307 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Cfap73J3QPZ5 306 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Pip5k1cO70161 661 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ifna1P01572 189 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ifna6P07350 189 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 GbaP17439 515 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Cox4i1P19783 169 aaKnown RBP8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ptger1P35375 405 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Cd81P35762 236 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Cnr1P47746 473 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Smpdl3aP70158 445 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tex35Q14BK3 207 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tmem109Q3UBX0 243 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Upf3bQ3ULL6 472 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Zfp957Q3UT76 567 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Slc47a2Q3V050 573 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ms4a13Q5FWC3 203 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm12253Q5NC48 229 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Nxph2Q61199 261 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Il10raQ61727 575 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 March1Q6NZQ8 289 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gpr68Q8BFQ3 365 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tmprss7Q8BIK6 829 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Cep95Q8BVV7 827 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Wipf1Q8K1I7 493 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Znf426Q8R1D1 550 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Calhm2Q8VEC4 323 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Park7Q99LX0 189 aaKnown RBP8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Rtn4rQ99PI8 473 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Bloc1s2Q9CWG9 143 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Q9CXL3 195 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Klhl35Q9CZ49 574 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Shmt2Q9CZN7 504 aaKnown RBP8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Nkain1Q9D035 207 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Lingo1Q9D1T0 614 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Psg23Q9D2U0 471 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 4930578G10RikQ9D4Q4 153 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Nsmce1Q9D720 266 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Mxra8Q9DBV4 442 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Cbx6Q9DBY5 414 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Olfr710Q9EP55 310 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Plag1Q9QYE0 499 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 PrkraQ9WTX2 313 aaKnown RBP8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 GsdmeQ9Z2D3 512 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Baz2bA2AUY4 2123 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Fcgr4A0A0B4J1G0 249 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Olfr1337A2ACY8 315 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Zcchc7B1AX39 541 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Galntl6E5D8G1 601 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Vmn1r60G3UY47 300 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Vmn2r71L7N2D8 855 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 S1pr1O08530 382 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 DhodhO35435 395 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Wsb1O54927 421 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gsta3P30115 221 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Capza1P47753 286 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Hes5P70120 167 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Pdss1Q33DR2 409 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tmem248Q3TBN1 314 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ccdc127Q3TC33 260 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Sec31bQ3TZ89 1158 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Sec24aQ3U2P1 1090 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Rnf223Q3UV31 285 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ccdc92bQ5SUE3 299 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 LbpQ61805 481 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ccdc117Q6PB51 277 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Mfsd13aQ6PDE8 519 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ntrk3Q6VNS1 825 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Haus4Q8BFT2 363 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 B3glctQ8BHT6 489 aa8.56□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms