RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 NclnQ8VCM8 563 aaKnown RBP21.59■■□□□ 1.05
Upf3a-201ENSMUST00000043767 Ferd3lQ923Z4 168 aa21.59■■□□□ 1.05
Upf3a-201ENSMUST00000043767 MlycdQ99J39 492 aa21.59■■□□□ 1.05
Upf3a-201ENSMUST00000043767 Gins4Q99LZ3 223 aa21.59■■□□□ 1.05
Upf3a-201ENSMUST00000043767 Nudt21Q9CQF3 227 aaKnown RBP21.59■■□□□ 1.05
Upf3a-201ENSMUST00000043767 TrilQ9DBY4 809 aa21.59■■□□□ 1.05
Upf3a-201ENSMUST00000043767 Tpst1O70281 370 aa21.58■■□□□ 1.05
Upf3a-201ENSMUST00000043767 Aldh16a1Q571I9 802 aa21.58■■□□□ 1.05
Upf3a-201ENSMUST00000043767 Map3k3Q61084 626 aa21.58■■□□□ 1.05
Upf3a-201ENSMUST00000043767 Oard1Q8R5F3 152 aa21.58■■□□□ 1.05
Upf3a-201ENSMUST00000043767 Ucn3Q924A4 164 aa21.58■■□□□ 1.05
Upf3a-201ENSMUST00000043767 Gpr146Q99LE2 333 aa21.58■■□□□ 1.05
Upf3a-201ENSMUST00000043767 Serpinb11Q9CQV3 388 aa21.58■■□□□ 1.05
Upf3a-201ENSMUST00000043767 PyurfQ9D1C3 112 aa21.58■■□□□ 1.05
Upf3a-201ENSMUST00000043767 Spesp1Q9D5A0 399 aa21.58■■□□□ 1.05
Upf3a-201ENSMUST00000043767 Q9DAD0 168 aa21.58■■□□□ 1.05
Upf3a-201ENSMUST00000043767 AnkhQ9JHZ2 492 aa21.58■■□□□ 1.05
Upf3a-201ENSMUST00000043767 Arpc3Q9JM76 178 aaKnown RBP21.58■■□□□ 1.05
Upf3a-201ENSMUST00000043767 Wnk2Q3UH66 2149 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Nid1P10493 1245 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Cr2P19070 1025 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Mc3rP33033 323 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Pros1Q08761 675 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Serpina3aQ6P4P1 422 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Cfap206Q6PE87 622 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Olfr1288Q7TQY0 312 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Piwil2Q8CDG1 971 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Msh4Q99MT2 958 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 TrmuQ9DAT5 417 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Apbb2Q9DBR4 760 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Il17bQ9QXT6 180 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 4932443I19RikA0A286YE38 169 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Tceal7A3KGA4 98 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Cacng1O70578 223 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Fth1P09528 182 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Gria1P23818 907 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Drd4P51436 387 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Rab8bP61028 207 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Adra1aP97718 466 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Xrra1Q3U3V8 786 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 H2-Eb2Q3UUV9 287 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 SctrQ5FWI2 447 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Eif1aQ60872 144 aaKnown RBP21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Gngt2Q61017 69 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Mapre3Q6PER3 281 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Doc2aQ7TNF0 405 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Rgs8Q8BXT1 180 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 CcsapQ8QZT2 252 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Cdt1Q8R4E9 557 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Pla2g15Q8VEB4 412 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Znf24Q91VN1 368 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Asb8Q91ZT9 288 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Mrps18bQ99N84 254 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 SdhbQ9CQA3 282 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Stard5Q9EPQ7 213 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Ifi30Q9ESY9 248 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Fkbp9Q9Z247 570 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Greb1Q3UHK3 1954 aa21.57■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Sdk2Q6V4S5 2176 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Vmn2r90E9PXJ8 863 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Slc16a8O35308 492 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 MdkP12025 140 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 VaspP70460 375 aaKnown RBP21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Olfr681Q3SXH8 315 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Tmem64Q3U145 381 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Trp53i11Q4QQM4 189 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Cyb5d2Q5SSH8 263 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 MertkQ60805 994 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Zfp418Q8BFS8 652 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Ablim2Q8BL65 612 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Erlec1Q8VEH8 483 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Olfr679Q8VGV0 315 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Cts7Q91ZF2 331 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Col25a1Q99MQ5 666 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Kat8Q9D1P2 458 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 ApmapQ9D7N9 415 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Kcnj10Q9JM63 379 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Lbx2Q9WUN8 195 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Ccdc166S4R181 449 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Scgb2b17S4R2V3 82 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Gm35315A0A1B0GRI2 571 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 A0A286YD13 301 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 PpigA2AR02 752 aaKnown RBP21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Olfr59B1ARL3 323 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Btnl2O70355 454 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Cbx3P23198 183 aaKnown RBP21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Gmeb2P58929 530 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Nup43P59235 380 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 AdmP97297 184 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Acsl6Q91WC3 697 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Chid1Q922Q9 393 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 MmadhcQ99LS1 296 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Trim16Q99PP9 556 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Zdhhc6Q9CPV7 413 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Ccdc3Q9D6Y1 273 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Prl8a8Q9DAS4 241 aa21.56■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Hs3st4D3YVV6 449 aa21.55■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Catsperg1E9Q355 1151 aa21.55■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Kcnab1P63143 401 aa21.55■■□□□ 1.04
Upf3a-201ENSMUST00000043767 Gm1123Q1RME4 390 aa21.55■■□□□ 1.04
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms