RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Asb3Q9WV72 525 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Il17dA0A0B4J1G4 205 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm10608E9PZ13 166 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 HcrtO55241 130 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Brd7O88665 651 aaKnown RBP9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Klrg1O88713 188 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 C1qbP14106 253 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Inpp5jP59644 1003 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Polr2cP97760 275 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 A1bgQ19LI2 512 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Trim63Q38HM4 350 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Elmod1Q3V1U8 326 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Chst2Q80WV3 530 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Plekha1Q8BUL6 383 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ptges2Q8BWM0 384 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Poglut1Q8BYB9 392 aaKnown RBP9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gpr20Q8BYC4 358 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Zdhhc1Q8R0N9 484 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mdm1Q9D067 708 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Adam21Q9JI76 729 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 IL36RNQ9QYY1 156 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Zfp605E9QAH2 694 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm21897J3KMP5 500 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 S100a2J3QMC7 104 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm21750L7N228 499 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 PigfO09101 219 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mab21l1O70299 359 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Nudt19P11930 357 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gpd1P13707 349 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cd48P18181 240 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Flt3lgP49772 232 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Secisbp2Q3U1C4 858 aaKnown RBP9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gdi2Q61598 445 aaKnown RBP9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Lpcat4Q6NVG1 524 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Dtd2Q8BHA3 168 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Znf436Q8BPP0 452 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rasgef1bQ8JZL7 473 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 SuoxQ8R086 546 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Kcnc4Q8R1C0 628 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Osgin1Q8VC10 478 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Tmem246Q91YV9 403 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 FcrlaQ920A9 352 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Tssk6Q925K9 273 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Hacl1Q9QXE0 581 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cyp11a1Q9QZ82 526 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Igkv17-121A0A0G2JFA8 117 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Zfp808B8JJZ4 753 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Matn4O89029 624 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 P01810 119 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 GzmcP08882 248 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 PahP16331 453 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ephx2P34914 554 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gnb5P62881 395 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 MthfsdQ3URQ7 372 aaKnown RBP9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ubfd1Q78JW9 368 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Sult1c1Q80VR3 304 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Hs3st5Q8BSL4 346 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 GnalQ8CGK7 381 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Pcdhb20Q91XZ9 799 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Zfp810Q99K45 461 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ppp6cQ9CQR6 305 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 1700080O16RikQ9D9G4 284 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm17949A0A1B0GRV7 212 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 CK137956B1AYM9 596 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm10718D3Z1I7 227 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm3149E9PW52 257 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm8362K7N6Y6 257 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Bnip2O54940 326 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Acvr1P37172 509 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Hnrnpa1P49312 320 aaKnown RBP9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Polr1cP52432 346 aaKnown RBP9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 ElocP83940 112 aaKnown RBP9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ranbp10Q6VN19 620 aaKnown RBP9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Reps2Q80XA6 521 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Zc3hc1Q80YV2 501 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Znf592Q8BHZ4 1262 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Derl2Q8BNI4 239 aaKnown RBP9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Lacc1Q8BZT9 430 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Slc43a2Q8CGA3 568 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Casc3Q8K3W3 698 aaKnown RBP9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr651Q8VG78 313 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr352Q8VGJ9 315 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rnf111Q99ML9 989 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Dppa5aQ9CQS7 118 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Zdhhc13Q9CWU2 622 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 GrifinQ9D1U0 144 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Fam122cQ9D5J5 180 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Fam69aQ9D6I7 428 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 PnckQ9QYK9 343 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Clec2iQ9WVF9 217 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Tex13aA2AFS9 377 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm266A6H634 200 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mgl2A9XX86 381 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Hs3st4D3YVV6 449 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm21738J3QP72 227 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm7970L7N271 213 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm7980L7N471 213 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Pdlim3O70209 316 aaKnown RBP9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Stt3aP46978 705 aa9.82□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Hsd17b3P70385 305 aa9.82□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 74 ms