RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Ces5aQ6AW46 575 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 PcnpQ6P8I4 178 aaKnown RBP15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Cramp1Q6PG95 1285 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Paqr9Q6TCG2 375 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gpc2Q8BKV1 579 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Shc2Q8BMC3 573 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Pdlim5Q8CI51 591 aaKnown RBP15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 AcoxlQ9DBS4 632 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Socs6Q9JLY0 533 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 DstnQ9R0P5 165 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tmem201A2A8U2 664 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gm5938A2AEN9 163 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tgm7A2ART8 616 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gm20431E9PY39 371 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 P01679 107 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Htr3aP23979 487 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Dsc1P55849 886 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Inpp5jP59644 1003 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Ruvbl1P60122 456 aaKnown RBP15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Fcho2Q3UQN2 809 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Defb48Q3UW22 87 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 CrhbpQ60571 322 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Ppp3r2Q63811 179 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Casd1Q7TN73 797 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Q8BHB7 409 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Prr11Q8BHE0 368 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Kiaa1671Q8BRV5 308 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Banf2Q8BVR0 90 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Steap2Q8BWB6 489 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Q8C3W1 322 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 EndovQ8C9A2 338 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Mat1aQ91X83 396 aaKnown RBP15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Ppp1r16aQ923M0 524 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Mcoln1Q99J21 580 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Dnase1l1Q9D7J6 314 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Deaf1Q9Z1T5 566 aa15.41■□□□□ 0.06
Trim28-201ENSMUST00000005705 Zfp534A2A7A1 661 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Hpse2B2RY83 592 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr605E9Q838 314 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Abcb1aP21447 1276 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Ephb3P54754 993 aaKnown RBP15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Mrps6P58064 125 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 EvlP70429 414 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Rab42Q0PD08 215 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Col19a1Q0VF58 1136 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Mat2aQ3THS6 395 aaKnown RBP15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Trpc5osQ3UHV4 110 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tlx2Q61663 284 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Zfp57Q8C6P8 421 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Lsm7Q9CQQ8 103 aaKnown RBP15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gm26657Q9CVR1 127 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Bud23Q9CY21 281 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Sohlh2Q9D489 467 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr1508Q9R0K4 310 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 SptbP15508 2128 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Mgl2A9XX86 381 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Rc3h2P0C090 1187 aaKnown RBP15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Csnk2bP67871 215 aaKnown RBP15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Tbx5P70326 518 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Spin1Q61142 262 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr26Q7TRB7 308 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Sra1Q80VJ2 232 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Mgat4bQ812F8 548 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr474Q8VFC9 310 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Mrgprb4Q91ZC0 321 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Myl9Q9CQ19 172 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr933Q9EQA0 308 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Psmg2Q9EST4 264 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gde1Q9JL56 331 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Kif26aQ52KG5 1881 aa15.4■□□□□ 0.06
Trim28-201ENSMUST00000005705 Gm20695H3BLK7 282 aa15.39■□□□□ 0.06
Trim28-201ENSMUST00000005705 MedagQ14BA6 303 aa15.39■□□□□ 0.06
Trim28-201ENSMUST00000005705 Myl12bQ3THE2 172 aaKnown RBP15.39■□□□□ 0.06
Trim28-201ENSMUST00000005705 Ube2fbQ3UWQ3 185 aa15.39■□□□□ 0.06
Trim28-201ENSMUST00000005705 WdcpQ6NV72 663 aa15.39■□□□□ 0.06
Trim28-201ENSMUST00000005705 Slco4c1Q8BGD4 722 aa15.39■□□□□ 0.06
Trim28-201ENSMUST00000005705 Bpifb2Q8C1E1 462 aa15.39■□□□□ 0.06
Trim28-201ENSMUST00000005705 Med17Q8VCD5 649 aaKnown RBP15.39■□□□□ 0.06
Trim28-201ENSMUST00000005705 Olfr986Q8VFN6 312 aa15.39■□□□□ 0.06
Trim28-201ENSMUST00000005705 EdaraddQ8VHX2 208 aa15.39■□□□□ 0.06
Trim28-201ENSMUST00000005705 Yaf2Q99LW6 179 aa15.39■□□□□ 0.06
Trim28-201ENSMUST00000005705 Atp5f1Q9CQQ7 256 aaKnown RBP15.39■□□□□ 0.06
Trim28-201ENSMUST00000005705 Plag1Q9QYE0 499 aa15.39■□□□□ 0.06
Trim28-201ENSMUST00000005705 Kcnk7Q9Z2T1 307 aa15.39■□□□□ 0.06
Trim28-201ENSMUST00000005705 Col5a3Q9JLI2 1739 aa15.39■□□□□ 0.05
Trim28-201ENSMUST00000005705 TomtA1Y9I9 258 aa15.39■□□□□ 0.05
Trim28-201ENSMUST00000005705 CatsperbA2RTF1 1109 aa15.39■□□□□ 0.05
Trim28-201ENSMUST00000005705 Zfp871G5E905 615 aa15.39■□□□□ 0.05
Trim28-201ENSMUST00000005705 Efna3O08545 230 aa15.39■□□□□ 0.05
Trim28-201ENSMUST00000005705 PlauP06869 433 aa15.39■□□□□ 0.05
Trim28-201ENSMUST00000005705 Ntf3P20181 258 aa15.39■□□□□ 0.05
Trim28-201ENSMUST00000005705 Klkb1P26262 638 aa15.39■□□□□ 0.05
Trim28-201ENSMUST00000005705 Gm14226Q3TZL0 686 aa15.39■□□□□ 0.05
Trim28-201ENSMUST00000005705 Ablim3Q69ZX8 682 aa15.39■□□□□ 0.05
Trim28-201ENSMUST00000005705 Rftn1Q6A0D4 554 aa15.39■□□□□ 0.05
Trim28-201ENSMUST00000005705 ShbQ6PD21 503 aa15.39■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr1101Q7TR59 310 aa15.39■□□□□ 0.05
Trim28-201ENSMUST00000005705 Sdr9c7Q8K3P0 313 aa15.39■□□□□ 0.05
Trim28-201ENSMUST00000005705 CipcQ8R0W1 432 aa15.39■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr166Q8VGX2 312 aa15.39■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 64.2 ms