RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Cntn6Q9JMB8 1028 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Tcea2Q9QVN7 299 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Serinc1Q9QZI8 453 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Col16a1Q8BLX7 1580 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Gm29106A0A087WSP8 697 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Mgat4eA6H684 439 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Gm11239E9Q5Z9 360 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Gm11237F2Z3W5 360 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Gm11238F2Z478 360 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 CryaaP24622 196 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 CryzP47199 331 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Cav3P51637 151 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Ufd1P70362 307 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Slc9a3r1P70441 355 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Gm428Q3UTE2 360 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Olfr318Q5NCD7 306 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Nlgn2Q69ZK9 836 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Doxl2Q6IMK7 723 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Shc4Q6S5L9 626 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Rsl1Q7M6Y1 485 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Olfr594Q7TRR4 311 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Rxfp3Q8BGE9 472 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 MylipQ8BM54 445 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Lrrc56Q8K375 552 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Vmn1r215Q8R264 300 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Vmn1r229Q8R2A9 306 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Oard1Q8R5F3 152 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Olfr401Q8VFX6 315 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Olfr643Q8VGY1 314 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Dennd2dQ91VV4 469 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 F11Q91Y47 624 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Ak5Q920P5 562 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Actl11Q9D5V1 1207 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 S100a16Q9D708 124 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Kcnip1Q9JJ57 227 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Cnot9Q9JKY0 299 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 St6galnac4Q9R2B6 360 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Ate1Q9Z2A5 516 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Olfr1153A2AVC0 318 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Rnaset2aC0HKG5 259 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Rnaset2bC0HKG6 259 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Cldn4O35054 210 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Hdac3O88895 424 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 C1qbP14106 253 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 St3gal3P97325 374 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Rps3aP97351 264 aaKnown RBP8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 TefmQ5SSK3 364 aaKnown RBP8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Thoc6Q5U4D9 341 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Trim24Q64127 1051 aaKnown RBP8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Alg8Q6P8H8 526 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Poglut1Q8BYB9 392 aaKnown RBP8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Lacc1Q8BZT9 430 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 TiparpQ8C1B2 657 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Wdr37Q8CBE3 496 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Gatad2aQ8CHY6 629 aaKnown RBP8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Olfr815Q8VFU0 316 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Snx11Q91WL6 271 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Dio3Q91ZI8 304 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 IvdQ9JHI5 424 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Nme7Q9QXL8 395 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Pfdn5Q9WU28 154 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Adgrb1Q3UHD1 1582 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Gm4131A0A140LJ24 318 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Vmn2r-ps130A0A140T8U3 855 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Obp1bA2AEP0 171 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Gm14743A2BHD2 171 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Vmn2r76E9Q3F5 853 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Prps1l3G3UXL2 318 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Gm21915J3QPM7 133 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Gm5724L7N264 670 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Sypl1O09117 261 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Psmb10O35955 273 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Apex1P28352 317 aaKnown RBP8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Tarbp2P97473 365 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Uap1l1Q3TW96 507 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Mccc2Q3ULD5 563 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Lrit2Q6PFC5 549 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Sall4Q8BX22 1067 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Fam78aQ8C552 283 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Olfr1100Q8VFM1 321 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Vsx1Q91V10 363 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Pcdhga12Q91XY7 932 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Srfbp1Q9CZ91 441 aaKnown RBP8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 PirQ9D711 290 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Prps1Q9D7G0 318 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Ptf1aQ9QX98 324 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 Cml5Q9QXS8 227 aa8.78□□□□□ -1
Ccdc47-201ENSMUST00000002043 IghdA0A0A6YW14 291 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Pramef25A2ASI9 494 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Prrt4B2RU40 902 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Sap18O55128 153 aaKnown RBP8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 ChadO55226 358 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Bdkrb2P32299 392 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Rab11bP46638 218 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Lefty2P57785 368 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Ptpn2Q06180 406 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Tigd2Q0VBL1 525 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Slc26a10Q5EBI0 492 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Tgoln1Q62313 353 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Sumf2Q8BPG6 308 aa8.77□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms