RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 COX6B1P14854 86 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 KRT15P19012 456 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 TNFRSF8P28908 595 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 FEN1P39748 380 aaKnown RBP23.2■■□□□ 1.3
VEGFA-232ENST00000640653 MAP4K2Q12851 820 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 RPS6KA2Q15349 733 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 CCDC153Q494R4 210 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 SPIN4Q56A73 249 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 TBCELQ5QJ74 424 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 ZYG11AQ6WRX3 759 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 TRILQ7L0X0 811 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 TDRPQ86YL5 185 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 MMP21Q8N119 569 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 CCNYL1Q8N7R7 359 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 C17orf47Q8NEP4 570 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 OR5M3Q8NGP4 307 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.2■■□□□ 1.35e-12■■■■■ 46.3
VEGFA-232ENST00000640653 SDCCAG3Q96C92 435 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 ACPTQ9BZG2 426 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 GSTO2Q9H4Y5 243 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 EMCNQ9ULC0 261 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 HRH3Q9Y5N1 445 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 NPFFR2Q9Y5X5 522 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 LIPGQ9Y5X9 500 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 GTF3C1Q12789 2109 aa23.2■■□□□ 1.3
VEGFA-232ENST00000640653 A0A1B0GVC2 190 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 PCDH7O60245 1069 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 SUSD5O60279 629 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 PTGER4P35408 488 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 SLCO1A2P46721 670 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 CCT5P48643 541 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 MAN2A2P49641 1150 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 ACSM2AQ08AH3 577 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 CDSNQ15517 529 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 PRICKLE4Q2TBC4 344 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 ACSM2BQ68CK6 577 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 CRYBG3Q68DQ2 2970 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 MCEMP1Q8IX19 187 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 CA5BP1Q8WTZ4 195 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 ADIPOR1Q96A54 375 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 DOHHQ9BU89 302 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 MID1IP1Q9NPA3 183 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 MAT2BQ9NZL9 334 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 CNOT11Q9UKZ1 510 aaKnown RBP23.19■■□□□ 1.3
VEGFA-232ENST00000640653 TIMM22Q9Y584 194 aa23.19■■□□□ 1.3
VEGFA-232ENST00000640653 CELSR2Q9HCU4 2923 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 GNG14A0A1W2PPG7 69 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 ANKRD33BA6NCL7 494 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 G3V2L1 256 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 H3BQF6 201 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 AQP7O14520 342 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 HCN1O60741 890 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 CHN1P15882 459 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 S1PR1P21453 382 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 HTR6P50406 440 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 RPP38P78345 283 aaKnown RBP23.18■■□□□ 1.3
VEGFA-232ENST00000640653 GXYLT1Q4G148 440 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 EMC4Q5J8M3 183 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 SH2D5Q6ZV89 423 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 LRRC25Q8N386 305 aaPredicted RBP23.18■■□□□ 1.3
VEGFA-232ENST00000640653 DIO2Q92813 273 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 JSRP1Q96MG2 331 aaPredicted RBP23.18■■□□□ 1.3
VEGFA-232ENST00000640653 SECISBP2Q96T21 854 aaKnown RBP23.18■■□□□ 1.3
VEGFA-232ENST00000640653 EXO5Q9H790 373 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 ZNF703Q9H7S9 590 aaPredicted RBP23.18■■□□□ 1.3
VEGFA-232ENST00000640653 PROK2Q9HC23 129 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 PFDN4Q9NQP4 134 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 B4GALT7Q9UBV7 327 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 BCAP29Q9UHQ4 241 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 UTS2RQ9UKP6 389 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 GRID1Q9ULK0 1009 aa23.18■■□□□ 1.3
VEGFA-232ENST00000640653 TRGV5A0A0B4J1U4 118 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 SERTM1A2A2V5 107 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 SMIM23A6NLE4 172 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 FIGNL2A6NMB9 653 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 PROCP04070 461 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 CELA3AP09093 270 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 DRD2P14416 443 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 HMGCS1Q01581 520 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 TMEM198Q66K66 360 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 FAM111BQ6SJ93 734 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 TMEM64Q6YI46 380 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 MARVELD2Q8N4S9 558 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 OR5M9Q8NGP3 310 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 ASB5Q8WWX0 329 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 RND1Q92730 232 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 SARAFQ96BY9 339 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 ZNF597Q96LX8 424 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 KCNA7Q96RP8 456 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 PNPLA3Q9NST1 481 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 QPCTLQ9NXS2 382 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 ZNF639Q9UID6 485 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 DLGAP4Q9Y2H0 992 aa23.17■■□□□ 1.3
VEGFA-232ENST00000640653 CACNA1DQ01668 2161 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 FOXO6A8MYZ6 492 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 LRATO95237 230 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 IL3P08700 152 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 PRF1P14222 555 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 GPX3P22352 226 aa23.16■■□□□ 1.3
VEGFA-232ENST00000640653 TIA1P31483 386 aaKnown RBP eCLIP23.16■■□□□ 1.39e-14■■■□□ 15.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms