RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 OR6C65A6NJZ3 312 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 SCAMP1O15126 338 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 CD160O95971 181 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 C2P06681 752 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 TRAPPC2P0DI81 140 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 TRAPPC2BP0DI82 140 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 MLLT3P42568 568 aaPredicted RBP5.41□□□□□ -1.54
RTTN-218ENST00000640408 SPIBQ01892 262 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 TOMM20Q15388 145 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 BEND4Q6ZU67 534 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 RBPMSQ93062 196 aaKnown RBP5.41□□□□□ -1.54
RTTN-218ENST00000640408 SLC6A18Q96N87 628 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 COL25A1Q9BXS0 654 aaPredicted RBP5.41□□□□□ -1.54
RTTN-218ENST00000640408 BEX2Q9BXY8 128 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 NUDT15Q9NV35 164 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 SDHAF2Q9NX18 166 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 OAZ3Q9UMX2 235 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 STX16-NPEPL1H3BU86 382 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 STX16O14662 325 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 TO15178 435 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 MRPS14O60783 128 aaKnown RBP5.41□□□□□ -1.54
RTTN-218ENST00000640408 SLC22A3O75751 556 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 S1PR4O95977 384 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 CSF2P04141 144 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 CDK1P06493 297 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 LHCGRP22888 699 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 RBMS1P29558 406 aaKnown RBP5.41□□□□□ -1.54
RTTN-218ENST00000640408 ALDH3B2P48448 385 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 RAB28P51157 221 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 NKX6-1P78426 367 aaPredicted RBP5.41□□□□□ -1.54
RTTN-218ENST00000640408 KIR2DS3Q14952 304 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 LPAL2Q16609 132 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 LSM12Q3MHD2 195 aaKnown RBP5.41□□□□□ -1.54
RTTN-218ENST00000640408 SLX4IPQ5VYV7 408 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 PAPD4Q6PIY7 484 aaKnown RBP5.41□□□□□ -1.54
RTTN-218ENST00000640408 ZNF367Q7RTV3 350 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 GPALPP1Q8IXQ4 340 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 TMEM105Q8N8V8 129 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 BEST4Q8NFU0 473 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 OR14K1Q8NGZ2 314 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 PHF10Q8WUB8 498 aaKnown RBP5.41□□□□□ -1.54
RTTN-218ENST00000640408 LRRN4Q8WUT4 740 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 KIAA1143Q96AT1 154 aaPredicted RBP5.41□□□□□ -1.54
RTTN-218ENST00000640408 FBXL20Q96IG2 436 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 COL21A1Q96P44 957 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 TREX2Q9BQ50 279 aaPredicted RBP5.41□□□□□ -1.54
RTTN-218ENST00000640408 TREX1Q9NSU2 369 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 SEMA4GQ9NTN9 838 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 PIH1D1Q9NWS0 290 aaKnown RBP5.41□□□□□ -1.54
RTTN-218ENST00000640408 MOCS1Q9NZB8 636 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 ENPP5Q9UJA9 477 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 NEU3Q9UQ49 428 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 KCNK6Q9Y257 313 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 PCDHGB6Q9Y5F9 930 aa5.41□□□□□ -1.54
RTTN-218ENST00000640408 A0A1B0GTQ1 180 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 HCN1O60741 890 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 NCK1P16333 377 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 TFEBP19484 476 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 MPSTP25325 297 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 IVDP26440 423 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 GMPRP36959 345 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 GPR3P46089 330 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 NAGLUP54802 743 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 EEFSECP57772 596 aaKnown RBP5.4□□□□□ -1.54
RTTN-218ENST00000640408 PFN3P60673 137 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 TXNL4AP83876 142 aaKnown RBP5.4□□□□□ -1.54
RTTN-218ENST00000640408 ABRQ12979 859 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 SF1Q15637 639 aaKnown RBP5.4□□□□□ -1.54
RTTN-218ENST00000640408 SPRED3Q2MJR0 410 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 AKR1C8PQ5T2L2 129 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 DET1Q7L5Y6 550 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 OR13H1Q8NG92 308 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 OR9A1PQ8NGU1 263 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 THAP6Q8TBB0 222 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 ZDHHC1Q8WTX9 485 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 NELL1Q92832 810 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 PHF21BQ96EK2 531 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 LINC00615Q96LM1 132 aaPredicted RBP5.4□□□□□ -1.54
RTTN-218ENST00000640408 ZNF578Q96N58 590 aaPredicted RBP5.4□□□□□ -1.54
RTTN-218ENST00000640408 NIPAL2Q9H841 368 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 LIN7BQ9HAP6 207 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 SERTAD3Q9UJW9 196 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 HRH3Q9Y5N1 445 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 LOC100130705A0A1B0GUX0 176 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 C9J4A7 227 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 SSX4O60224 188 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 OTCP00480 354 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 FCER2P06734 321 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 KLK3P07288 261 aaPredicted RBP5.4□□□□□ -1.54
RTTN-218ENST00000640408 RPL3P39023 403 aaKnown RBP5.4□□□□□ -1.54
RTTN-218ENST00000640408 CDH11P55287 796 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 P2RX3P56373 397 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 TAS2R39P59534 338 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 CTBSQ01459 385 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 MXD1Q05195 221 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 TRA2AQ13595 282 aaKnown RBP eCLIP5.4□□□□□ -1.54
RTTN-218ENST00000640408 ZMYND11Q15326 602 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 EXOC3L2Q2M3D2 409 aa5.4□□□□□ -1.54
RTTN-218ENST00000640408 RNASE12Q5GAN4 147 aaKnown RBP5.4□□□□□ -1.54
RTTN-218ENST00000640408 TCTE1Q5JU00 501 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms